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The map label for this gene is ybhR [C]

Identifier: 218883809

GI number: 218883809

Start: 467124

End: 467990

Strand: Direct

Name: ybhR [C]

Synonym: DKAM_0498

Alternate gene names: 218883809

Gene position: 467124-467990 (Clockwise)

Preceding gene: 218883808

Following gene: 218883810

Centisome position: 34.22

GC content: 46.37

Gene sequence:

>867_bases
ATGAACGGCTTCAACGCGTTTGCCTCATTATTCTATAGGCAGGTTAAAAGATGGGCTAGCTCCCGCTCTAGACTCATCTC
AACGATAATACAGCCACTGCTCTGGCTGGTGTTCCTCGGCCTGGGCTTCGGCGGAGTATTCAATCCAGAGAACATTAATA
CCTCGGCCTTAGGGATCAACGCTACCGTAATGCCGGTGCCAGTAAATGTTACTGGCATCGTGTCAAGATACTTTAACATG
GTTTTCGGCGGTATAGACTACGTAACGTTCATGGTTAGCGGCATGGTTGCGATGACAGCATTCATGGGTAGCTTTATAGC
CGGTATAAGCGTGATATGGGATAAGCAATTCGGCTTCCTCAAGGAGACCCTGGTGGCACCAGCTCCTAGAAGCGTTGTAA
TAGCTGGAAGGATATTTGGCGACGCATTCGTCAACACTCTGCAGTCAGCCATCATAATAACGCTGGCACTGCTCTTCACA
AATAACATAAGGATAGCTGGGATACCCATATCACTACTATACGTCTTCATAATGGCGGTGGGGTTCACTGGCCTAGGGAC
AGCTATATCGCTTAAATTCAGCAGTATGGAGGGATTCCAGATGATTGTCAACATAATTACAATGCCCTTGATGTTTATGA
GTGGAGTCTTCTACCCGGTTAAATCCATGCCTACATGGATGCAGTATGTTGCAATGTTTAATCCATTAACATATGCCGTA
CATGCTTCAAGGTACTGGCTCACCGGTGCTGATGTAGGCTTCGACTACATGAACCCACTGGTCGACATAGTAGTTTTATC
GATTATATCGGTTGTCCTCCTAGTAGTCGCTATGAGGATGTTTGAGAGGGCTACAATCGAGGATTAA

Upstream 100 bases:

>100_bases
CTCTCTCAACGAAGTATTCCTACATCTCACAGGAAGAGAGTTAAGGGATAGCCTTGAAGCATCGGCTCCCATGGCTTTCA
GGGGTAGGAGGTGGCGTTAA

Downstream 100 bases:

>100_bases
TTTCATTGATTATTTAAAAACCAACAACCTCTTTTTTGTCCCTTCTATCGAAAATATTTAAATAATAATTAACAATGAAT
ACAAATGGTGGTGCTAACAA

Product: daunorubicin resistance ABC transporter, inner membrane subunit B

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; ABC Transporter; Multidrug Efflux ABC Transporter; Multidrug ABC Transporter Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Multidrug ABC Transporter Permease; ABC Transporter Permease Component; Daunorubicin Resistance ABC Transporter Permease; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; Antibiotic ABC Transporter Transmembrane Protein; Daunorubicin Resistance Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Permease; Efflux ABC Transporter Permease Protein; Permease; Drug ABC Transporter Membrane Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC Transporter Permease ABC Transporter Permease Protein; Daunorubicin Resistance Transmembrane Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC Transporter Transmembrane Protein; Multidrug ABC Transporter; ABC-2 Type Transporter Superfamily Protein; Antibiotic Resistance ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Protein; ABC Efflux Pump Inner Membrane Subunit; 16S RRNA Processing Protein RimM; Drug Exporter ABC Transporter Permease; ABC Transporter Integral Membrane Subunit; ABC-2 Transporter Component; ABC Multidrug Transporter Permease Component; ABC Type Transporter Permease Component; ABC-Type Drug Export System; Abc-2 Type Transporter; ABC-2 Type Tranporter; Daunorubicin Resistance ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNGFNAFASLFYRQVKRWASSRSRLISTIIQPLLWLVFLGLGFGGVFNPENINTSALGINATVMPVPVNVTGIVSRYFNM
VFGGIDYVTFMVSGMVAMTAFMGSFIAGISVIWDKQFGFLKETLVAPAPRSVVIAGRIFGDAFVNTLQSAIIITLALLFT
NNIRIAGIPISLLYVFIMAVGFTGLGTAISLKFSSMEGFQMIVNIITMPLMFMSGVFYPVKSMPTWMQYVAMFNPLTYAV
HASRYWLTGADVGFDYMNPLVDIVVLSIISVVLLVVAMRMFERATIED

Sequences:

>Translated_288_residues
MNGFNAFASLFYRQVKRWASSRSRLISTIIQPLLWLVFLGLGFGGVFNPENINTSALGINATVMPVPVNVTGIVSRYFNM
VFGGIDYVTFMVSGMVAMTAFMGSFIAGISVIWDKQFGFLKETLVAPAPRSVVIAGRIFGDAFVNTLQSAIIITLALLFT
NNIRIAGIPISLLYVFIMAVGFTGLGTAISLKFSSMEGFQMIVNIITMPLMFMSGVFYPVKSMPTWMQYVAMFNPLTYAV
HASRYWLTGADVGFDYMNPLVDIVVLSIISVVLLVVAMRMFERATIED
>Mature_288_residues
MNGFNAFASLFYRQVKRWASSRSRLISTIIQPLLWLVFLGLGFGGVFNPENINTSALGINATVMPVPVNVTGIVSRYFNM
VFGGIDYVTFMVSGMVAMTAFMGSFIAGISVIWDKQFGFLKETLVAPAPRSVVIAGRIFGDAFVNTLQSAIIITLALLFT
NNIRIAGIPISLLYVFIMAVGFTGLGTAISLKFSSMEGFQMIVNIITMPLMFMSGVFYPVKSMPTWMQYVAMFNPLTYAV
HASRYWLTGADVGFDYMNPLVDIVVLSIISVVLLVVAMRMFERATIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=177, Percent_Identity=27.683615819209, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31733; Mature: 31733

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFNAFASLFYRQVKRWASSRSRLISTIIQPLLWLVFLGLGFGGVFNPENINTSALGIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
ATVMPVPVNVTGIVSRYFNMVFGGIDYVTFMVSGMVAMTAFMGSFIAGISVIWDKQFGFL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KETLVAPAPRSVVIAGRIFGDAFVNTLQSAIIITLALLFTNNIRIAGIPISLLYVFIMAV
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
GFTGLGTAISLKFSSMEGFQMIVNIITMPLMFMSGVFYPVKSMPTWMQYVAMFNPLTYAV
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHE
HASRYWLTGADVGFDYMNPLVDIVVLSIISVVLLVVAMRMFERATIED
ECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGFNAFASLFYRQVKRWASSRSRLISTIIQPLLWLVFLGLGFGGVFNPENINTSALGIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
ATVMPVPVNVTGIVSRYFNMVFGGIDYVTFMVSGMVAMTAFMGSFIAGISVIWDKQFGFL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KETLVAPAPRSVVIAGRIFGDAFVNTLQSAIIITLALLFTNNIRIAGIPISLLYVFIMAV
HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
GFTGLGTAISLKFSSMEGFQMIVNIITMPLMFMSGVFYPVKSMPTWMQYVAMFNPLTYAV
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHE
HASRYWLTGADVGFDYMNPLVDIVVLSIISVVLLVVAMRMFERATIED
ECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA