Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883760

Identifier: 218883760

GI number: 218883760

Start: 419537

End: 420427

Strand: Direct

Name: 218883760

Synonym: DKAM_0449

Alternate gene names: NA

Gene position: 419537-420427 (Clockwise)

Preceding gene: 218883751

Following gene: 218883765

Centisome position: 30.73

GC content: 46.35

Gene sequence:

>891_bases
GTGGTTGATATGGGTTCGACAGGCATGCTTACAGGTTTAATATATTTAAGCACAAGCATCTTAATGTGGTCGCTTACACC
GAGCCTGATAGCTATGGATAAGGCTAGGTATAATAGTTTCACGACCAACGGGTTAAGGGCGCTACTGGCGGGATTGATAA
TGCTTCCCTTTACAGCTAGAGCGATTTTCATGGATCTATACAGATACCTCGTAGCAGGCGCGGTGATTGGTACAACCGGC
ATATTGATCGGGGACTCCCTCTACATATTATCGATAAGGAGGCTGGGTCCCGGGTTAGCTGTGATAATCTGCTACACTTA
CGTGATTACAACCCAGTTGCTTAAACAATTAATTGAGCCTGGTGCAGGCATATATGCGATGCTGCTGGCAGCGCTACTGG
CTATAGTAGGGGTATATATTACTGTACGTAGACAGGTAACAATTTTAACCATGAATAAGACGGGGTTGCTGGCTGCATTG
ATCACTAATATCTCATGGGCTGTGTGGAGCCTACTCTCATGGATCTATATCAGACACATGGGCCTCGATGTGCTGGCCTT
AACCACCACTAGGTTGATTATCCCGGGTTTGATACTGCTAGCCTACTCGAGTAGAATATACACATTAAGGGAGCTCTTGA
CCGAGGCACCCAGAAGGCTTAAGTTCACTATGATTACAGGTGTGACGGGGTATATTATAGGGGGAACGGCATACCTGGAG
TCCATGAGATACCTGAATGTAGCACAGGCGACAATAGCGACTTCACTAGTGCCCGTATTAAACCAGTTGATAAGCTCCAA
GGTATCAGGGAAAGGAATAATGATGGAGGAGGTAGCTGGAACAATACTGGTTGGTGTATCGATAGCATTGTCAACGCTCT
ACGGTGGCTAG

Upstream 100 bases:

>100_bases
TATAGATGGTCTTCACAGCCTACTGGTTTTGATGAATTATCGATGATGTGTGTTATTTTATGTCGTACCCTATTTATCAT
TAAGTGTAGCATGCTGACCG

Downstream 100 bases:

>100_bases
AGATCCCTCACCCTCTTAACAGCGTAGAAGAACGATGAGAGTCTAAGACATGAGGAGGCAATGAAGACCAGCTTCATGTA
CTCTAAACCCATTGAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG
ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL
ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE
SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG

Sequences:

>Translated_296_residues
MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG
ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL
ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE
SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG
>Mature_296_residues
MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG
ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL
ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE
SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32059; Mature: 32059

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTAR
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIFMDLYRYLVAGAVIGTTGILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
GAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAALITNISWAVWSLLSWIYIRHM
CCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCHHHHCCHHHHHH
SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTAR
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIFMDLYRYLVAGAVIGTTGILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
GAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAALITNISWAVWSLLSWIYIRHM
CCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCHHHHCCHHHHHH
SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA