Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883760
Identifier: 218883760
GI number: 218883760
Start: 419537
End: 420427
Strand: Direct
Name: 218883760
Synonym: DKAM_0449
Alternate gene names: NA
Gene position: 419537-420427 (Clockwise)
Preceding gene: 218883751
Following gene: 218883765
Centisome position: 30.73
GC content: 46.35
Gene sequence:
>891_bases GTGGTTGATATGGGTTCGACAGGCATGCTTACAGGTTTAATATATTTAAGCACAAGCATCTTAATGTGGTCGCTTACACC GAGCCTGATAGCTATGGATAAGGCTAGGTATAATAGTTTCACGACCAACGGGTTAAGGGCGCTACTGGCGGGATTGATAA TGCTTCCCTTTACAGCTAGAGCGATTTTCATGGATCTATACAGATACCTCGTAGCAGGCGCGGTGATTGGTACAACCGGC ATATTGATCGGGGACTCCCTCTACATATTATCGATAAGGAGGCTGGGTCCCGGGTTAGCTGTGATAATCTGCTACACTTA CGTGATTACAACCCAGTTGCTTAAACAATTAATTGAGCCTGGTGCAGGCATATATGCGATGCTGCTGGCAGCGCTACTGG CTATAGTAGGGGTATATATTACTGTACGTAGACAGGTAACAATTTTAACCATGAATAAGACGGGGTTGCTGGCTGCATTG ATCACTAATATCTCATGGGCTGTGTGGAGCCTACTCTCATGGATCTATATCAGACACATGGGCCTCGATGTGCTGGCCTT AACCACCACTAGGTTGATTATCCCGGGTTTGATACTGCTAGCCTACTCGAGTAGAATATACACATTAAGGGAGCTCTTGA CCGAGGCACCCAGAAGGCTTAAGTTCACTATGATTACAGGTGTGACGGGGTATATTATAGGGGGAACGGCATACCTGGAG TCCATGAGATACCTGAATGTAGCACAGGCGACAATAGCGACTTCACTAGTGCCCGTATTAAACCAGTTGATAAGCTCCAA GGTATCAGGGAAAGGAATAATGATGGAGGAGGTAGCTGGAACAATACTGGTTGGTGTATCGATAGCATTGTCAACGCTCT ACGGTGGCTAG
Upstream 100 bases:
>100_bases TATAGATGGTCTTCACAGCCTACTGGTTTTGATGAATTATCGATGATGTGTGTTATTTTATGTCGTACCCTATTTATCAT TAAGTGTAGCATGCTGACCG
Downstream 100 bases:
>100_bases AGATCCCTCACCCTCTTAACAGCGTAGAAGAACGATGAGAGTCTAAGACATGAGGAGGCAATGAAGACCAGCTTCATGTA CTCTAAACCCATTGAGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG
Sequences:
>Translated_296_residues MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG >Mature_296_residues MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTARAIFMDLYRYLVAGAVIGTTG ILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEPGAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAAL ITNISWAVWSLLSWIYIRHMGLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32059; Mature: 32059
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTAR CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AIFMDLYRYLVAGAVIGTTGILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCC GAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAALITNISWAVWSLLSWIYIRHM CCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCHHHHCCHHHHHH SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVDMGSTGMLTGLIYLSTSILMWSLTPSLIAMDKARYNSFTTNGLRALLAGLIMLPFTAR CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AIFMDLYRYLVAGAVIGTTGILIGDSLYILSIRRLGPGLAVIICYTYVITTQLLKQLIEP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCC GAGIYAMLLAALLAIVGVYITVRRQVTILTMNKTGLLAALITNISWAVWSLLSWIYIRHM CCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDVLALTTTRLIIPGLILLAYSSRIYTLRELLTEAPRRLKFTMITGVTGYIIGGTAYLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEECCHHHHCCHHHHHH SMRYLNVAQATIATSLVPVLNQLISSKVSGKGIMMEEVAGTILVGVSIALSTLYGG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA