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The map label for this gene is acaC [H]

Identifier: 218883700

GI number: 218883700

Start: 360391

End: 360813

Strand: Reverse

Name: acaC [H]

Synonym: DKAM_0389

Alternate gene names: 218883700

Gene position: 360813-360391 (Counterclockwise)

Preceding gene: 218883701

Following gene: 218883699

Centisome position: 26.43

GC content: 45.39

Gene sequence:

>423_bases
ATGATGAAGATATCTGTACCTCCATCCTGGAGAACAAGACTTGACAGATACAGGCTTAAAGCCAGTAAGTGCAGGGACTG
TGGTAGAGTGGCCTATCCGGCTTCAAGTATATGCAGGTTCTGTGGATCAAGGAATATCGAATATATCGAGTTGATAAATG
AGGAGGCCAGGTTGATCACGTGGACAATAATTTATAGCGCGATGGAGGGCTTCGAGGAGAAACGCCCCCTCATGATAGGT
ATACTGGAGACCATTAATAGTAAGGCACGGATAATGGCTCCCCTCACCGATGTATTACCAGAGGAGTTAAAGCCGGGTAT
TTTAATGGAGCCGGTCTTGAGGAGGATATCCGAGGACAATGAAGCAGGATTAATACACTACGGTATATCATATAGACCGG
TGTTTAAGCGAGTTGGAGTCTAA

Upstream 100 bases:

>100_bases
ATTAGCACCCACCGTGGATGACTATATAGTGAGGAAGGCATTGATAGATTATGCCCTATATGCTAAATACAGGAGGCTGA
TTAACAGGATAAGGTGAAAA

Downstream 100 bases:

>100_bases
CATAGATTTTTTACTTGAATCCCTTAGGAAATCCGGGAAGCCATTTGAATACATAAATGAATTAAAACTAAGTGAAAACC
TGAGAGCACTTCTAAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MMKISVPPSWRTRLDRYRLKASKCRDCGRVAYPASSICRFCGSRNIEYIELINEEARLITWTIIYSAMEGFEEKRPLMIG
ILETINSKARIMAPLTDVLPEELKPGILMEPVLRRISEDNEAGLIHYGISYRPVFKRVGV

Sequences:

>Translated_140_residues
MMKISVPPSWRTRLDRYRLKASKCRDCGRVAYPASSICRFCGSRNIEYIELINEEARLITWTIIYSAMEGFEEKRPLMIG
ILETINSKARIMAPLTDVLPEELKPGILMEPVLRRISEDNEAGLIHYGISYRPVFKRVGV
>Mature_140_residues
MMKISVPPSWRTRLDRYRLKASKCRDCGRVAYPASSICRFCGSRNIEYIELINEEARLITWTIIYSAMEGFEEKRPLMIG
ILETINSKARIMAPLTDVLPEELKPGILMEPVLRRISEDNEAGLIHYGISYRPVFKRVGV

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 16121; Mature: 16121

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKISVPPSWRTRLDRYRLKASKCRDCGRVAYPASSICRFCGSRNIEYIELINEEARLIT
CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHH
WTIIYSAMEGFEEKRPLMIGILETINSKARIMAPLTDVLPEELKPGILMEPVLRRISEDN
HHHHHHHHHHHHHCCCCEEHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHCCCC
EAGLIHYGISYRPVFKRVGV
CCCEEEECCCCHHHHHHCCC
>Mature Secondary Structure
MMKISVPPSWRTRLDRYRLKASKCRDCGRVAYPASSICRFCGSRNIEYIELINEEARLIT
CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHH
WTIIYSAMEGFEEKRPLMIGILETINSKARIMAPLTDVLPEELKPGILMEPVLRRISEDN
HHHHHHHHHHHHHCCCCEEHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHCCCC
EAGLIHYGISYRPVFKRVGV
CCCEEEECCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425 [H]