| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883694
Identifier: 218883694
GI number: 218883694
Start: 355104
End: 355478
Strand: Reverse
Name: 218883694
Synonym: DKAM_0383
Alternate gene names: NA
Gene position: 355478-355104 (Counterclockwise)
Preceding gene: 218883695
Following gene: 218883693
Centisome position: 26.04
GC content: 41.33
Gene sequence:
>375_bases TTGGGTAGAAAACCTTTTTTAGCCAGCGGTAAAATACTTGGAGACTACTCTGTTTTAATTAAATACTTTGAAATATGCAT GTCTAAAGGCGGTGAGTGCATGGATCTGCTTCCTTCACGGGAGATACTGGATGACATTAAAGAGATGGCCGAGAATAAAG GGTATTCTTATCTAGAGGTTTTAGGAGAAATCCGTGTAAGAATAGAGGATAAGGTTAATTGTGATATAGCTGTGGAAGCA TATAAAATGGTTCACGGTATAAGTGTATCCTGCGAGGACGCCAGGATGGAGCTTCTGAAAGAAATAGTTGCATGGTATCT GGAGGCGGCTGAAACACTGGGACTCGTCAAGCTTAAGGAATCATGGAAGCCATAG
Upstream 100 bases:
>100_bases TTGGAGTCGCTTAGAAACCTCTACAACTCTGTTAATGAGAAACATAAGGAGTATATAAGGGAGTACTTGAGAAATATTAC TCTTTAAAGGATGAACAGGT
Downstream 100 bases:
>100_bases TGATATATATGTTAACAGTTAACACGTTGATAAATGTCCTGGGAAGACTGGAGAAGATGCTTAGACAGGAATACGGTGAG GCAAGCCTTAAGGAGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MGRKPFLASGKILGDYSVLIKYFEICMSKGGECMDLLPSREILDDIKEMAENKGYSYLEVLGEIRVRIEDKVNCDIAVEA YKMVHGISVSCEDARMELLKEIVAWYLEAAETLGLVKLKESWKP
Sequences:
>Translated_124_residues MGRKPFLASGKILGDYSVLIKYFEICMSKGGECMDLLPSREILDDIKEMAENKGYSYLEVLGEIRVRIEDKVNCDIAVEA YKMVHGISVSCEDARMELLKEIVAWYLEAAETLGLVKLKESWKP >Mature_123_residues GRKPFLASGKILGDYSVLIKYFEICMSKGGECMDLLPSREILDDIKEMAENKGYSYLEVLGEIRVRIEDKVNCDIAVEAY KMVHGISVSCEDARMELLKEIVAWYLEAAETLGLVKLKESWKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14070; Mature: 13938
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKPFLASGKILGDYSVLIKYFEICMSKGGECMDLLPSREILDDIKEMAENKGYSYLEV CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHH LGEIRVRIEDKVNCDIAVEAYKMVHGISVSCEDARMELLKEIVAWYLEAAETLGLVKLKE HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SWKP CCCC >Mature Secondary Structure GRKPFLASGKILGDYSVLIKYFEICMSKGGECMDLLPSREILDDIKEMAENKGYSYLEV CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHH LGEIRVRIEDKVNCDIAVEAYKMVHGISVSCEDARMELLKEIVAWYLEAAETLGLVKLKE HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SWKP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA