| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883678
Identifier: 218883678
GI number: 218883678
Start: 340566
End: 341519
Strand: Direct
Name: 218883678
Synonym: DKAM_0367
Alternate gene names: NA
Gene position: 340566-341519 (Clockwise)
Preceding gene: 218883676
Following gene: 218883679
Centisome position: 24.95
GC content: 43.92
Gene sequence:
>954_bases ATGGAGGTTGTAGGGTTAGACGCATCAATAATAGAGAGGGTTTCGAGAGTCTTAAGAAACAATATTGAGAGGCTTGACAC ATTGGATCTTTGTGATACAAAATTCTACCCGCCCTGCAACGATAACCCAGAAAACATCCTCAGATACTTTATAGTCATGG TGGCCATGGATCATAGGCTGAGTAGACCTGGAAAACCATACGAGGCCATGCTTGAAGATGGGTTCTACCATGGTGCTGAT CTACTATATAGGCTTGGAATGAAAAAGTATTCGGAGGACCCGGGGTTCTTTGATCCAGCTCGCTTAGCACAGGTGAGAAT CGAGGAAGTTAAATCCTGGCTCAGCATAGGTAGTGCAAGTCCACCGGATATAGATGCCAGAACTATTCTTCTAAGGGATT TGGGGTTGAAAATATCTAAACTATACGAGGGCAGGGTTACCAGGCTCATAGAGGTATCAAGAGGGAGGCTCTACGGCTCT TTAATGGAGCCTGGATTCATAGATCTCCTAAGGGTTTTCAGAGCCTATGAAGACCCTGTTGAGAAGAAGTCATTATTACT CGCGAAATTCCTGGCCAAAAGAAGGGTATTCACGTTTCTCGATAAACTAGGGATCCCAGTTGACAATCACTTATCAAGGA TAGCGTATAGGCTTGGAATAGTGATGGTTTCAGGCAATCTATGGGTTAAGATAAGGGAGCAGAGGGAAGTCTCACGTGAA GAAGACATATTGTTAAGGATGGTTATTAGACGAGGATACGAGGCTATATCCAGTGAGGCAGGTATAGACCCGGCCACCCT GGATGACTATTTTTGGCTGATGGGTAGGAGGATATGTCTAAGGGATAACCCACCTAGATGTGATAAATGCTTGTTCAAGG GTTTCTGCAGAGCTAGAAGGAATAATAGTTTTATGGTCCCTGAGCACTATTACTATGATACATGGTATTACTGA
Upstream 100 bases:
>100_bases CCGCGGACATAGTACTATCCCTTAATATTCTTTCTCCCACTCCCAGTTTAAAGATAAGTTAAACTAGCATAAAACCCTAG ATAAAATAAAGGTGAGTATT
Downstream 100 bases:
>100_bases TAGGTGGATATCTTTGAGTAGCCAGAACAACAATAACACAGACATTAACAAGGGTATTAACAGGCTTAGAAGCCTCAGCA GGCTTGAGAGGATTATTGTA
Product: iron-sulfur cluster loop
Products: NA
Alternate protein names: Iron-Sulfur Cluster Loop Containing Protein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MEVVGLDASIIERVSRVLRNNIERLDTLDLCDTKFYPPCNDNPENILRYFIVMVAMDHRLSRPGKPYEAMLEDGFYHGAD LLYRLGMKKYSEDPGFFDPARLAQVRIEEVKSWLSIGSASPPDIDARTILLRDLGLKISKLYEGRVTRLIEVSRGRLYGS LMEPGFIDLLRVFRAYEDPVEKKSLLLAKFLAKRRVFTFLDKLGIPVDNHLSRIAYRLGIVMVSGNLWVKIREQREVSRE EDILLRMVIRRGYEAISSEAGIDPATLDDYFWLMGRRICLRDNPPRCDKCLFKGFCRARRNNSFMVPEHYYYDTWYY
Sequences:
>Translated_317_residues MEVVGLDASIIERVSRVLRNNIERLDTLDLCDTKFYPPCNDNPENILRYFIVMVAMDHRLSRPGKPYEAMLEDGFYHGAD LLYRLGMKKYSEDPGFFDPARLAQVRIEEVKSWLSIGSASPPDIDARTILLRDLGLKISKLYEGRVTRLIEVSRGRLYGS LMEPGFIDLLRVFRAYEDPVEKKSLLLAKFLAKRRVFTFLDKLGIPVDNHLSRIAYRLGIVMVSGNLWVKIREQREVSRE EDILLRMVIRRGYEAISSEAGIDPATLDDYFWLMGRRICLRDNPPRCDKCLFKGFCRARRNNSFMVPEHYYYDTWYY >Mature_317_residues MEVVGLDASIIERVSRVLRNNIERLDTLDLCDTKFYPPCNDNPENILRYFIVMVAMDHRLSRPGKPYEAMLEDGFYHGAD LLYRLGMKKYSEDPGFFDPARLAQVRIEEVKSWLSIGSASPPDIDARTILLRDLGLKISKLYEGRVTRLIEVSRGRLYGS LMEPGFIDLLRVFRAYEDPVEKKSLLLAKFLAKRRVFTFLDKLGIPVDNHLSRIAYRLGIVMVSGNLWVKIREQREVSRE EDILLRMVIRRGYEAISSEAGIDPATLDDYFWLMGRRICLRDNPPRCDKCLFKGFCRARRNNSFMVPEHYYYDTWYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37047; Mature: 37047
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVGLDASIIERVSRVLRNNIERLDTLDLCDTKFYPPCNDNPENILRYFIVMVAMDHRL CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SRPGKPYEAMLEDGFYHGADLLYRLGMKKYSEDPGFFDPARLAQVRIEEVKSWLSIGSAS CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PPDIDARTILLRDLGLKISKLYEGRVTRLIEVSRGRLYGSLMEPGFIDLLRVFRAYEDPV CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCHH EKKSLLLAKFLAKRRVFTFLDKLGIPVDNHLSRIAYRLGIVMVSGNLWVKIREQREVSRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCEEEEEECHHHCCHH EDILLRMVIRRGYEAISSEAGIDPATLDDYFWLMGRRICLRDNPPRCDKCLFKGFCRARR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHC NNSFMVPEHYYYDTWYY CCCEECCCCCCCCCCCC >Mature Secondary Structure MEVVGLDASIIERVSRVLRNNIERLDTLDLCDTKFYPPCNDNPENILRYFIVMVAMDHRL CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SRPGKPYEAMLEDGFYHGADLLYRLGMKKYSEDPGFFDPARLAQVRIEEVKSWLSIGSAS CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PPDIDARTILLRDLGLKISKLYEGRVTRLIEVSRGRLYGSLMEPGFIDLLRVFRAYEDPV CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCHH EKKSLLLAKFLAKRRVFTFLDKLGIPVDNHLSRIAYRLGIVMVSGNLWVKIREQREVSRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCEEEEEECHHHCCHH EDILLRMVIRRGYEAISSEAGIDPATLDDYFWLMGRRICLRDNPPRCDKCLFKGFCRARR HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHC NNSFMVPEHYYYDTWYY CCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA