Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883616

Identifier: 218883616

GI number: 218883616

Start: 284255

End: 284785

Strand: Reverse

Name: 218883616

Synonym: DKAM_0305

Alternate gene names: NA

Gene position: 284785-284255 (Counterclockwise)

Preceding gene: 218883621

Following gene: 218883615

Centisome position: 20.86

GC content: 51.6

Gene sequence:

>531_bases
GTGGGAAGGGAGAATCAATTGAGTTCACCGAGATACCTACCGCTCCCCGAGCCCGTGATCACCCCTGGTGAAAACCCTGT
CCCAGGCATGAATCATAGTGTTGTAACCACGACCACGGGTATTCATGGCACCATGACGGGCCCCCTGCAGCAAGGTGTAT
CGATGCCGCTGCTCATACTACTTGCAGCCGCCTCACTACTCATAATAGCATTACTCATATTATCCATTGCCTCGACGAGG
ATGCCCCGGGGTTCAACCATGTTTAAGATCTCCGTGAGCAAGGAGGATGACCTGAGAATACAGTACTCCTATACAGGGGT
CAAGGAGATACTATGGCGCACCCTGAGAAAGCTTAGGAGTATCCATGGATGCGGCACGTGTACGCCGAGGGAGCTGGCTC
GTCTAAGGATCTCCATGGTCTTGAAGAGGTTTAGCGAGGTATATGAAGACGTTGTCTACGGTGATCAACATAGAGATGAC
GCCTTAGAGGTTGTTAGACTCATCGAGGAGGGAGGTGGATCAAGTGGTTAA

Upstream 100 bases:

>100_bases
GGTGATCCTACTACCCGACCTGTTGATACCGCTAGAGTATAGCCTGTGGTGCATGAAAATGTTATATCCAGTACCCATAT
AATAAAACCAGGTTACCTTG

Downstream 100 bases:

>100_bases
AGTATATTGGTTCGGCGTATTCATCCTGCTACTACTTATAACCGGGTACTCTGGGGTACGGATAAGAGGGGAGCTAGTTG
GGGATCCTCCCTCAGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTR
MPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDD
ALEVVRLIEEGGGSSG

Sequences:

>Translated_176_residues
MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTR
MPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDD
ALEVVRLIEEGGGSSG
>Mature_175_residues
GRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTRM
PRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDA
LEVVRLIEEGGGSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19345; Mature: 19214

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLIL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH
LAAASLLIIALLILSIASTRMPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
IHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDALEVVRLIEEGGGSSG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLIL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH
LAAASLLIIALLILSIASTRMPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
IHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDALEVVRLIEEGGGSSG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA