| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883616
Identifier: 218883616
GI number: 218883616
Start: 284255
End: 284785
Strand: Reverse
Name: 218883616
Synonym: DKAM_0305
Alternate gene names: NA
Gene position: 284785-284255 (Counterclockwise)
Preceding gene: 218883621
Following gene: 218883615
Centisome position: 20.86
GC content: 51.6
Gene sequence:
>531_bases GTGGGAAGGGAGAATCAATTGAGTTCACCGAGATACCTACCGCTCCCCGAGCCCGTGATCACCCCTGGTGAAAACCCTGT CCCAGGCATGAATCATAGTGTTGTAACCACGACCACGGGTATTCATGGCACCATGACGGGCCCCCTGCAGCAAGGTGTAT CGATGCCGCTGCTCATACTACTTGCAGCCGCCTCACTACTCATAATAGCATTACTCATATTATCCATTGCCTCGACGAGG ATGCCCCGGGGTTCAACCATGTTTAAGATCTCCGTGAGCAAGGAGGATGACCTGAGAATACAGTACTCCTATACAGGGGT CAAGGAGATACTATGGCGCACCCTGAGAAAGCTTAGGAGTATCCATGGATGCGGCACGTGTACGCCGAGGGAGCTGGCTC GTCTAAGGATCTCCATGGTCTTGAAGAGGTTTAGCGAGGTATATGAAGACGTTGTCTACGGTGATCAACATAGAGATGAC GCCTTAGAGGTTGTTAGACTCATCGAGGAGGGAGGTGGATCAAGTGGTTAA
Upstream 100 bases:
>100_bases GGTGATCCTACTACCCGACCTGTTGATACCGCTAGAGTATAGCCTGTGGTGCATGAAAATGTTATATCCAGTACCCATAT AATAAAACCAGGTTACCTTG
Downstream 100 bases:
>100_bases AGTATATTGGTTCGGCGTATTCATCCTGCTACTACTTATAACCGGGTACTCTGGGGTACGGATAAGAGGGGAGCTAGTTG GGGATCCTCCCTCAGTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTR MPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDD ALEVVRLIEEGGGSSG
Sequences:
>Translated_176_residues MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTR MPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDD ALEVVRLIEEGGGSSG >Mature_175_residues GRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLILLAAASLLIIALLILSIASTRM PRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRSIHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDA LEVVRLIEEGGGSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19345; Mature: 19214
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH LAAASLLIIALLILSIASTRMPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRS HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHH IHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDALEVVRLIEEGGGSSG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GRENQLSSPRYLPLPEPVITPGENPVPGMNHSVVTTTTGIHGTMTGPLQQGVSMPLLIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCHHHHHH LAAASLLIIALLILSIASTRMPRGSTMFKISVSKEDDLRIQYSYTGVKEILWRTLRKLRS HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHH IHGCGTCTPRELARLRISMVLKRFSEVYEDVVYGDQHRDDALEVVRLIEEGGGSSG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA