Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883593

Identifier: 218883593

GI number: 218883593

Start: 262539

End: 263288

Strand: Direct

Name: 218883593

Synonym: DKAM_0282

Alternate gene names: NA

Gene position: 262539-263288 (Clockwise)

Preceding gene: 218883591

Following gene: 218883594

Centisome position: 19.23

GC content: 48.67

Gene sequence:

>750_bases
GTGTACAAGGAGCTTTATGACAGCAATGGCTTCAAATACTATGTGCTGAAGGGATTCGAGGATCTAGTGGAGTTGCTCAG
GGGTAAGGGGGTGGGCGTTGTAGTTTACCTAAGGGTGGGTCTCCTAGATAAATTGGTATTCAAGCTACTCGGGATCCCCG
TGTACATTTGTGGGGACAGGGTTATCCTGGGGTTCTCAGTGGGGAGCAAGGATCCCGGGGTCCCCATATGTGGTGCGAAT
GAATATGGGGCTAAGGCCATTGAGCTTGGTGTAGATGCTAAGCTGAGGCTTTATAGCCTTAAGTTACCGAGGATGCTTGC
CCTCCCCTTATCAGAGATCAACCGGGTAGCGAAATTCATAGTGGTGGGGGCCTCAGGAGTAGTCATCAATGTTTCAACAG
CTATATTCTCACGTAGGCTACTCATAGGTCTGGATCAATTCATAGCTAATCCATTAGCGTCAAGCATAGGCTTCGAGTCA
AGCATTATATGGAATTTCGTTCTGCACGAGGAGTGGACTTTTAAGGAGGCTGGACTCAACAAGGGGGTCGGTGAGAGGTT
GAAGAGGCTTGTAAAGTACCATTTAGCCAGTGCTGCAAGCTGGGCCAGCCAGGCAGCATGTGCTACATTACTACCAGCCT
ACCTTGCCACACCATTCTGGGCTGGGCAGGTCATAGGGGTGTTAATAGGGTTCGCGCTAAACTTTTTATTAGGATATATT
TATACATGGAGCTGGAGTAGACTAAGGTGA

Upstream 100 bases:

>100_bases
GGCTGTCCCACTCAGACATTTTAATCGCCGTTAGTCTACTGGATTAAAATAGCTGGGTTAAGTATTTTACGTATTAGATG
GTGCATCATTGTTGAGGCAT

Downstream 100 bases:

>100_bases
AGGTGTTCACAATGGGCTTGAAGCATGGTAAATACATCTATGTTAAGAGGAGTGATGGATGGTATGTGAAGGTCAGGGTA
CTCAATATAAGATTTGGCAA

Product: GtrA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MYKELYDSNGFKYYVLKGFEDLVELLRGKGVGVVVYLRVGLLDKLVFKLLGIPVYICGDRVILGFSVGSKDPGVPICGAN
EYGAKAIELGVDAKLRLYSLKLPRMLALPLSEINRVAKFIVVGASGVVINVSTAIFSRRLLIGLDQFIANPLASSIGFES
SIIWNFVLHEEWTFKEAGLNKGVGERLKRLVKYHLASAASWASQAACATLLPAYLATPFWAGQVIGVLIGFALNFLLGYI
YTWSWSRLR

Sequences:

>Translated_249_residues
MYKELYDSNGFKYYVLKGFEDLVELLRGKGVGVVVYLRVGLLDKLVFKLLGIPVYICGDRVILGFSVGSKDPGVPICGAN
EYGAKAIELGVDAKLRLYSLKLPRMLALPLSEINRVAKFIVVGASGVVINVSTAIFSRRLLIGLDQFIANPLASSIGFES
SIIWNFVLHEEWTFKEAGLNKGVGERLKRLVKYHLASAASWASQAACATLLPAYLATPFWAGQVIGVLIGFALNFLLGYI
YTWSWSRLR
>Mature_249_residues
MYKELYDSNGFKYYVLKGFEDLVELLRGKGVGVVVYLRVGLLDKLVFKLLGIPVYICGDRVILGFSVGSKDPGVPICGAN
EYGAKAIELGVDAKLRLYSLKLPRMLALPLSEINRVAKFIVVGASGVVINVSTAIFSRRLLIGLDQFIANPLASSIGFES
SIIWNFVLHEEWTFKEAGLNKGVGERLKRLVKYHLASAASWASQAACATLLPAYLATPFWAGQVIGVLIGFALNFLLGYI
YTWSWSRLR

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27416; Mature: 27416

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKELYDSNGFKYYVLKGFEDLVELLRGKGVGVVVYLRVGLLDKLVFKLLGIPVYICGDR
CCCHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCE
VILGFSVGSKDPGVPICGANEYGAKAIELGVDAKLRLYSLKLPRMLALPLSEINRVAKFI
EEEEEECCCCCCCCEEECCCCCCCEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHHHH
VVGASGVVINVSTAIFSRRLLIGLDQFIANPLASSIGFESSIIWNFVLHEEWTFKEAGLN
EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCHHHCCCC
KGVGERLKRLVKYHLASAASWASQAACATLLPAYLATPFWAGQVIGVLIGFALNFLLGYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YTWSWSRLR
HHCCHHHCC
>Mature Secondary Structure
MYKELYDSNGFKYYVLKGFEDLVELLRGKGVGVVVYLRVGLLDKLVFKLLGIPVYICGDR
CCCHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCEEEECCE
VILGFSVGSKDPGVPICGANEYGAKAIELGVDAKLRLYSLKLPRMLALPLSEINRVAKFI
EEEEEECCCCCCCCEEECCCCCCCEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHHHH
VVGASGVVINVSTAIFSRRLLIGLDQFIANPLASSIGFESSIIWNFVLHEEWTFKEAGLN
EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCHHHCCCC
KGVGERLKRLVKYHLASAASWASQAACATLLPAYLATPFWAGQVIGVLIGFALNFLLGYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YTWSWSRLR
HHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA