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The map label for this gene is araG [C]

Identifier: 218883579

GI number: 218883579

Start: 246847

End: 247800

Strand: Reverse

Name: araG [C]

Synonym: DKAM_0268

Alternate gene names: 218883579

Gene position: 247800-246847 (Counterclockwise)

Preceding gene: 218883580

Following gene: 218883578

Centisome position: 18.15

GC content: 49.27

Gene sequence:

>954_bases
ATGATAGCTGATCCAGAGGTGATAGTGTTCGATGAACCATTAATGTGGCTCGACGACAAGGGAGTCAACGAGTTCCTGAA
GCTAGCCGAGGCATTGAGGTTCATGGGCAAAACACTGGTATTCATGGAGCACAGGTTCATGCCATTACTGAGTGTAGTCG
ACAAGGTGTATGTGATGAGGAATGGTGTGCTCGAGGATAGAACCATTGATGTATACAGGCTTAAACACGAGACGTATCCT
GAAGCAGCTACAACATATAATGTATCCATGAATAAGGAAGACCCTGTAACAGTGTTAAAAGCCGAGAACGTGTGGTATAG
GGTAAACGGCTCGAACCTGCTTAAAGGTGTTGATTTAACCGTGTCTAAAGGAGACCTCTTATACATATATGGTGAAAACG
GCTCCGGGAAAACCACGTTACTGAGGATATTGGCTGGCTACCTGAAGCCTGTGAAAGGCAGGGTGTGGAAGAGCGGGGAA
GCAGTATATGTCCCGCAAAACATCCACATGTTCTACACCGAGGAATCCATAACAAGGGAGATAGAGGGGATCTGTAGATC
ATCGAGGAGTAAAAGGGAATGCATTGAAAAAGGCTTGAGGATCACGGCGGGGCTCAACGTGGATCCGTCACAGCCAGCCT
TTAATCTATCCCATGGACAAATGGTCAAGCTAGCTGTCAGCCTAGCAGGGTTGAGGGAGGAGGTTGACATAGTACTCCTC
GACGAACCCTTCTCAGGCCTCACCTATGTTGACAGGGTTAAGCTTGTGAATAGCCTCATTGGGCTTGGTAAAGCGGTGGT
TATAGCTGTAAGTAGTAGTGATATACTGGGGTATCCACCGGGCTCCAAGACCTACAGGCTGGAGAACGGCGTCCTACAGA
GGAGTGAAGCAAAGGGGTCCACCGTGGCATCCTATGCCAGCATAGCCGCCGGGCTACTCGGTGACGCCGTGTGA

Upstream 100 bases:

>100_bases
TGGAAGGCTGTTGAATCGGTGAGTGCGCGTGAACTCCTAGACAAGTATTTTTTTCGAGCTATCCGGGGGCCAAGCCCGTA
GAGCCCTGGTCGCTAAGTCC

Downstream 100 bases:

>100_bases
TCAGGGATTTAGCCTACATGTTCATCCAGTCCAAGAGGGATCCAGGCTTCAGCACGCTGTGTAAGATCATCTACTCGCTC
GGCTTGATCGCCGTGCTCAC

Product: ABC transporter-like protein

Products: ADP; phosphate; arabinose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIADPEVIVFDEPLMWLDDKGVNEFLKLAEALRFMGKTLVFMEHRFMPLLSVVDKVYVMRNGVLEDRTIDVYRLKHETYP
EAATTYNVSMNKEDPVTVLKAENVWYRVNGSNLLKGVDLTVSKGDLLYIYGENGSGKTTLLRILAGYLKPVKGRVWKSGE
AVYVPQNIHMFYTEESITREIEGICRSSRSKRECIEKGLRITAGLNVDPSQPAFNLSHGQMVKLAVSLAGLREEVDIVLL
DEPFSGLTYVDRVKLVNSLIGLGKAVVIAVSSSDILGYPPGSKTYRLENGVLQRSEAKGSTVASYASIAAGLLGDAV

Sequences:

>Translated_317_residues
MIADPEVIVFDEPLMWLDDKGVNEFLKLAEALRFMGKTLVFMEHRFMPLLSVVDKVYVMRNGVLEDRTIDVYRLKHETYP
EAATTYNVSMNKEDPVTVLKAENVWYRVNGSNLLKGVDLTVSKGDLLYIYGENGSGKTTLLRILAGYLKPVKGRVWKSGE
AVYVPQNIHMFYTEESITREIEGICRSSRSKRECIEKGLRITAGLNVDPSQPAFNLSHGQMVKLAVSLAGLREEVDIVLL
DEPFSGLTYVDRVKLVNSLIGLGKAVVIAVSSSDILGYPPGSKTYRLENGVLQRSEAKGSTVASYASIAAGLLGDAV
>Mature_317_residues
MIADPEVIVFDEPLMWLDDKGVNEFLKLAEALRFMGKTLVFMEHRFMPLLSVVDKVYVMRNGVLEDRTIDVYRLKHETYP
EAATTYNVSMNKEDPVTVLKAENVWYRVNGSNLLKGVDLTVSKGDLLYIYGENGSGKTTLLRILAGYLKPVKGRVWKSGE
AVYVPQNIHMFYTEESITREIEGICRSSRSKRECIEKGLRITAGLNVDPSQPAFNLSHGQMVKLAVSLAGLREEVDIVLL
DEPFSGLTYVDRVKLVNSLIGLGKAVVIAVSSSDILGYPPGSKTYRLENGVLQRSEAKGSTVASYASIAAGLLGDAV

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1788210, Length=302, Percent_Identity=20.8609271523179, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786975, Length=337, Percent_Identity=25.2225519287834, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787758, Length=165, Percent_Identity=29.6969696969697, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 35057; Mature: 35057

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADPEVIVFDEPLMWLDDKGVNEFLKLAEALRFMGKTLVFMEHRFMPLLSVVDKVYVMR
CCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHH
NGVLEDRTIDVYRLKHETYPEAATTYNVSMNKEDPVTVLKAENVWYRVNGSNLLKGVDLT
CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEE
VSKGDLLYIYGENGSGKTTLLRILAGYLKPVKGRVWKSGEAVYVPQNIHMFYTEESITRE
EECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCEEEECCCEEEEEECHHHHHH
IEGICRSSRSKRECIEKGLRITAGLNVDPSQPAFNLSHGQMVKLAVSLAGLREEVDIVLL
HHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEE
DEPFSGLTYVDRVKLVNSLIGLGKAVVIAVSSSDILGYPPGSKTYRLENGVLQRSEAKGS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCEEEECCCCCCCCCCCCC
TVASYASIAAGLLGDAV
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIADPEVIVFDEPLMWLDDKGVNEFLKLAEALRFMGKTLVFMEHRFMPLLSVVDKVYVMR
CCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHH
NGVLEDRTIDVYRLKHETYPEAATTYNVSMNKEDPVTVLKAENVWYRVNGSNLLKGVDLT
CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEE
VSKGDLLYIYGENGSGKTTLLRILAGYLKPVKGRVWKSGEAVYVPQNIHMFYTEESITRE
EECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCEEEECCCEEEEEECHHHHHH
IEGICRSSRSKRECIEKGLRITAGLNVDPSQPAFNLSHGQMVKLAVSLAGLREEVDIVLL
HHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEE
DEPFSGLTYVDRVKLVNSLIGLGKAVVIAVSSSDILGYPPGSKTYRLENGVLQRSEAKGS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCEEEECCCCCCCCCCCCC
TVASYASIAAGLLGDAV
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; arabinose [Periplasm]; H2O [C]

Specific reaction: ATP + arabinose [Periplasm] + H2O = ADP + phosphate + arabinose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]