Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
---|---|
Accession | NC_011766 |
Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883566
Identifier: 218883566
GI number: 218883566
Start: 235343
End: 236143
Strand: Reverse
Name: 218883566
Synonym: DKAM_0255
Alternate gene names: NA
Gene position: 236143-235343 (Counterclockwise)
Preceding gene: 218883567
Following gene: 218883565
Centisome position: 17.3
GC content: 48.69
Gene sequence:
>801_bases GTGAAGGAAGTGATCACACAGACGCTCACAGCCTACTTTAAGGCGGAGATGCTGAGAGAGCATGGTTTCTGGATAAGCCT GATAGGCTTCACTCTCTGGGGATTCCTCTTCATAGGACCTATAGTATTGTTCTCGCCGAGCAGCCTAGATAAGCAGGTTA CAGCGGGCTATACGCTGGTGTCTATGTTAGTGTTCTCCTCCTATATGACTGCTACATGGGATTGGAGTAGTCACTTAAGG TGGATGCTTAGAAGCGGTGTCCTGGAGCAGGCTATCGTAGCTGGTAGAAGCTTGTACTTGTACTTTATTGGGCTCCTCCC AGTTAGCTTGATGTGGCTTGTGATAGAGTTCGGGGAGATCTATTTATTACTAACACTACTCTACGCTCCCCCATACCTCA GCGTCTCCGATCCACTCCTATTTTTCACCGTGCTTGCAATGATACTAACCGTGCTGGCGGCACATAGTCTGCTACTGGGG GCATCTATCCTTGCGTCTGGAACCAGTAATATAATAGTCGAGCTCCTCTCCTGGATAATACCTATAGCCAGTGGCGGGTT AACACCCCTTGCTTCAATGCCCCGACTGGTACAGATAGTGGCATTGGCAACGCCATACTCGTATCCAGCCGAGCTACTCA GACACGTCCTCCTTAAAGCGCCAGTAGTAATGCCTACTGATAAGCTTATCCTCTATGGTCTACCCTATGCTCTAGCATAC TTGATTACAGCGTTGGCCGTCAATCACTACGTGTTTACCAGGATCAGGAGAAACGGTGTACCCTCTATAGGGATGTATTA G
Upstream 100 bases:
>100_bases TAGGGCTTGCAACAGCTCTCACATTGATCTACCTGCCTATAGGTGTTAGAAGCATTGTTAAATGGGAGGGCAAGCTCCGT GCAGCAGGGGTGAAGACGGA
Downstream 100 bases:
>100_bases TTTACCATTAAATAGATATATTAAGAAAATATTATATATGCGAATACTGATAATAAAAATATGGTGGACTACATGTCTTA TAAGGCTGAACTTGAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKEVITQTLTAYFKAEMLREHGFWISLIGFTLWGFLFIGPIVLFSPSSLDKQVTAGYTLVSMLVFSSYMTATWDWSSHLR WMLRSGVLEQAIVAGRSLYLYFIGLLPVSLMWLVIEFGEIYLLLTLLYAPPYLSVSDPLLFFTVLAMILTVLAAHSLLLG ASILASGTSNIIVELLSWIIPIASGGLTPLASMPRLVQIVALATPYSYPAELLRHVLLKAPVVMPTDKLILYGLPYALAY LITALAVNHYVFTRIRRNGVPSIGMY
Sequences:
>Translated_266_residues MKEVITQTLTAYFKAEMLREHGFWISLIGFTLWGFLFIGPIVLFSPSSLDKQVTAGYTLVSMLVFSSYMTATWDWSSHLR WMLRSGVLEQAIVAGRSLYLYFIGLLPVSLMWLVIEFGEIYLLLTLLYAPPYLSVSDPLLFFTVLAMILTVLAAHSLLLG ASILASGTSNIIVELLSWIIPIASGGLTPLASMPRLVQIVALATPYSYPAELLRHVLLKAPVVMPTDKLILYGLPYALAY LITALAVNHYVFTRIRRNGVPSIGMY >Mature_266_residues MKEVITQTLTAYFKAEMLREHGFWISLIGFTLWGFLFIGPIVLFSPSSLDKQVTAGYTLVSMLVFSSYMTATWDWSSHLR WMLRSGVLEQAIVAGRSLYLYFIGLLPVSLMWLVIEFGEIYLLLTLLYAPPYLSVSDPLLFFTVLAMILTVLAAHSLLLG ASILASGTSNIIVELLSWIIPIASGGLTPLASMPRLVQIVALATPYSYPAELLRHVLLKAPVVMPTDKLILYGLPYALAY LITALAVNHYVFTRIRRNGVPSIGMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29586; Mature: 29586
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVITQTLTAYFKAEMLREHGFWISLIGFTLWGFLFIGPIVLFSPSSLDKQVTAGYTLV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SMLVFSSYMTATWDWSSHLRWMLRSGVLEQAIVAGRSLYLYFIGLLPVSLMWLVIEFGEI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YLLLTLLYAPPYLSVSDPLLFFTVLAMILTVLAAHSLLLGASILASGTSNIIVELLSWII HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PIASGGLTPLASMPRLVQIVALATPYSYPAELLRHVLLKAPVVMPTDKLILYGLPYALAY HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LITALAVNHYVFTRIRRNGVPSIGMY HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKEVITQTLTAYFKAEMLREHGFWISLIGFTLWGFLFIGPIVLFSPSSLDKQVTAGYTLV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SMLVFSSYMTATWDWSSHLRWMLRSGVLEQAIVAGRSLYLYFIGLLPVSLMWLVIEFGEI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YLLLTLLYAPPYLSVSDPLLFFTVLAMILTVLAAHSLLLGASILASGTSNIIVELLSWII HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PIASGGLTPLASMPRLVQIVALATPYSYPAELLRHVLLKAPVVMPTDKLILYGLPYALAY HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LITALAVNHYVFTRIRRNGVPSIGMY HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA