Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883561

Identifier: 218883561

GI number: 218883561

Start: 231795

End: 232142

Strand: Reverse

Name: 218883561

Synonym: DKAM_0250

Alternate gene names: NA

Gene position: 232142-231795 (Counterclockwise)

Preceding gene: 218883563

Following gene: 218883560

Centisome position: 17.0

GC content: 49.14

Gene sequence:

>348_bases
TTGGCGAGGCTAGGGGTGAAGAAGGCTCTCTGCGTGTTTTACACAGCGTCATTCATGCTTGGAGTGGTTGAGGGAGCCTA
CTACACGGTTTCACGTGACATAGTGTATAAACACATGGGCTTGAACTACATCTTCATGAGCATCCTCATAGCCTCTGAGA
CCATGCCCGGCTTCTTCTCGGTTGTAGGAGGCATGGTAAGCGATATCATTGGTAGGAGGGGGATGCTACTGCTCGGTATA
TCATCCTCAATGCCCCTCGCATTAATAGGCTTCACCAGTGTAGAGTTCATCCCCCTGCTAATATTAGTCCACGGTGTTAC
AACAAGCATGGTTCAGCCTACTCGTTAA

Upstream 100 bases:

>100_bases
TCGAGAAGATGAAACATCTACACGGCAAAAAAGTATATGCAATAATGATAGCAGAAGACTAACACCAACACATACAAACC
ATTATAAAACCAGAAACAAC

Downstream 100 bases:

>100_bases
TGGGCGCCTCAAACTCCCTTGGATGGGCAATTGGAGGAGTCCTCGGGGGATACATAACTGAATACCTACCCTACTCCACA
GGCATGTCCCTCCTAGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MARLGVKKALCVFYTASFMLGVVEGAYYTVSRDIVYKHMGLNYIFMSILIASETMPGFFSVVGGMVSDIIGRRGMLLLGI
SSSMPLALIGFTSVEFIPLLILVHGVTTSMVQPTR

Sequences:

>Translated_115_residues
MARLGVKKALCVFYTASFMLGVVEGAYYTVSRDIVYKHMGLNYIFMSILIASETMPGFFSVVGGMVSDIIGRRGMLLLGI
SSSMPLALIGFTSVEFIPLLILVHGVTTSMVQPTR
>Mature_114_residues
ARLGVKKALCVFYTASFMLGVVEGAYYTVSRDIVYKHMGLNYIFMSILIASETMPGFFSVVGGMVSDIIGRRGMLLLGIS
SSMPLALIGFTSVEFIPLLILVHGVTTSMVQPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12504; Mature: 12373

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLGVKKALCVFYTASFMLGVVEGAYYTVSRDIVYKHMGLNYIFMSILIASETMPGFFS
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
VVGGMVSDIIGRRGMLLLGISSSMPLALIGFTSVEFIPLLILVHGVTTSMVQPTR
HHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARLGVKKALCVFYTASFMLGVVEGAYYTVSRDIVYKHMGLNYIFMSILIASETMPGFFS
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
VVGGMVSDIIGRRGMLLLGISSSMPLALIGFTSVEFIPLLILVHGVTTSMVQPTR
HHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA