| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883512
Identifier: 218883512
GI number: 218883512
Start: 187368
End: 188570
Strand: Reverse
Name: 218883512
Synonym: DKAM_0199
Alternate gene names: NA
Gene position: 188570-187368 (Counterclockwise)
Preceding gene: 218883513
Following gene: 218883511
Centisome position: 13.81
GC content: 45.55
Gene sequence:
>1203_bases ATGCCCAGAGTACTAGGTATGGATCCTGGCTCTAAGAGTATTGATATATGTGGTCTCTGCGATGGGAGAATATGCTTCGA GAAATCAATAGATACCGTTGAGGCGAGTAAGAATCCCCTCAGAGTAGTGGAGCTTGTTGAGGGCTTCCCAGGGGTTGATC TAATAGCTCTCCCCTCGGGCTATGGTGTAGAGCTCACATATCTGGATCATATAGAGGACAACATGTTGGAGGACTGGTAT TACACTTTCATACTAGCCACCACCAAGGAGGAGATAGTGGAAGGCTTAAACAGGAATAATATTGGGGCATTCATCTACGA TGCAATGGGGAAGATAGTGAGGGAGTTGAAGAAGAGAAGGGTTAGAGGGATATTTATTCCAGCAGTAATAAACCTTGAAA CAATCCCCCTACATAGGAAGCTCAACAAGATCGATATGGGTACAGCTGATAAGCTAGCCGTTGCAGTCCTAGGGATACAC GAGGTATCTCAGGAGCATAAAATACCCTATGATAGAGTTAACTACATACACGTAGAGATGGGGTTCGGCTATAACGCAGT GATAGCAGTTAGGAATGGGGTCATAGTTGATGGTGTCGGCGGCACCTTAATGCCTGGCCCAGCATTTCTAACTTCAGGTG CACTGGATCTGGAAGTAGTACAGGCCGTAGGGTTATTCAGCAAAACAGATGTGTTTTCCACTGGTTGTAATGTATTAACT AATACTATGTCACCGGAGGAATTCATATCTAGGATAAGCGAAGATCCATTAGCAGAGATCTGCTTCGACGCGATGATTGA GTCTATTGTAAAGACGGTTTACTCTATGATCCCGCTGGTGGGCGAGGTGCGTGAGATACTGTTATCAGGCAGGGTTTCAA GAAACCCTGTCGTTAAGGATTACATAGAGGATAAACTCGGGGACTTGACGAGCATCAGGGCGATGAAGGGGTTGCCGGAT GCATCCATAGTAAAAGAGACCGCACAAGGATACGCTGTAATAGCTGATGGCATAGCTGGCGGCGTCTTCAAAGAACTAGT TGATCACGTTGGAATAAGAAGTGCTAGAGGCACCTCTCTTGACTACATAGTTCACCCGAGATTCATGAAATCGAAGCTTG GAAAGAAGTTCGCTGAGTTAAGGAGGCTAATGCATGGGGAAGCATTTAATATAAGATGGTGGAGTAGCCTTGGCTCTAAT TAG
Upstream 100 bases:
>100_bases GAGCCTGAAACGGTTTAACAGTATTCTATCACTCTATAATAGTTAAATCCGATGCTTAATATCACATTCCACTTAGTTAT GGTTTAGGGAGGATCCCGAA
Downstream 100 bases:
>100_bases GGAGGGGATACTCTACGAGGCGATAATATCTCTACTAGATGATCTGGACAAACCCTATGCAACACCATCGGGGTTCTGGA AGTCAAAGGGGAGAATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Butyrate Kinase
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPRVLGMDPGSKSIDICGLCDGRICFEKSIDTVEASKNPLRVVELVEGFPGVDLIALPSGYGVELTYLDHIEDNMLEDWY YTFILATTKEEIVEGLNRNNIGAFIYDAMGKIVRELKKRRVRGIFIPAVINLETIPLHRKLNKIDMGTADKLAVAVLGIH EVSQEHKIPYDRVNYIHVEMGFGYNAVIAVRNGVIVDGVGGTLMPGPAFLTSGALDLEVVQAVGLFSKTDVFSTGCNVLT NTMSPEEFISRISEDPLAEICFDAMIESIVKTVYSMIPLVGEVREILLSGRVSRNPVVKDYIEDKLGDLTSIRAMKGLPD ASIVKETAQGYAVIADGIAGGVFKELVDHVGIRSARGTSLDYIVHPRFMKSKLGKKFAELRRLMHGEAFNIRWWSSLGSN
Sequences:
>Translated_400_residues MPRVLGMDPGSKSIDICGLCDGRICFEKSIDTVEASKNPLRVVELVEGFPGVDLIALPSGYGVELTYLDHIEDNMLEDWY YTFILATTKEEIVEGLNRNNIGAFIYDAMGKIVRELKKRRVRGIFIPAVINLETIPLHRKLNKIDMGTADKLAVAVLGIH EVSQEHKIPYDRVNYIHVEMGFGYNAVIAVRNGVIVDGVGGTLMPGPAFLTSGALDLEVVQAVGLFSKTDVFSTGCNVLT NTMSPEEFISRISEDPLAEICFDAMIESIVKTVYSMIPLVGEVREILLSGRVSRNPVVKDYIEDKLGDLTSIRAMKGLPD ASIVKETAQGYAVIADGIAGGVFKELVDHVGIRSARGTSLDYIVHPRFMKSKLGKKFAELRRLMHGEAFNIRWWSSLGSN >Mature_399_residues PRVLGMDPGSKSIDICGLCDGRICFEKSIDTVEASKNPLRVVELVEGFPGVDLIALPSGYGVELTYLDHIEDNMLEDWYY TFILATTKEEIVEGLNRNNIGAFIYDAMGKIVRELKKRRVRGIFIPAVINLETIPLHRKLNKIDMGTADKLAVAVLGIHE VSQEHKIPYDRVNYIHVEMGFGYNAVIAVRNGVIVDGVGGTLMPGPAFLTSGALDLEVVQAVGLFSKTDVFSTGCNVLTN TMSPEEFISRISEDPLAEICFDAMIESIVKTVYSMIPLVGEVREILLSGRVSRNPVVKDYIEDKLGDLTSIRAMKGLPDA SIVKETAQGYAVIADGIAGGVFKELVDHVGIRSARGTSLDYIVHPRFMKSKLGKKFAELRRLMHGEAFNIRWWSSLGSN
Specific function: Unknown
COG id: COG2441
COG function: function code C; Predicted butyrate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44055; Mature: 43924
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVLGMDPGSKSIDICGLCDGRICFEKSIDTVEASKNPLRVVELVEGFPGVDLIALPSG CCCEECCCCCCCCEEEEECCCCCEEHHCCCCHHHCCCCCHHHHHHHCCCCCCEEEEECCC YGVELTYLDHIEDNMLEDWYYTFILATTKEEIVEGLNRNNIGAFIYDAMGKIVRELKKRR CCEEEEEHHHHHHHHHHHHEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VRGIFIPAVINLETIPLHRKLNKIDMGTADKLAVAVLGIHEVSQEHKIPYDRVNYIHVEM HCEEEEEEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE GFGYNAVIAVRNGVIVDGVGGTLMPGPAFLTSGALDLEVVQAVGLFSKTDVFSTGCNVLT CCCCEEEEEEECCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCHHCCHHHHHCCHHHC NTMSPEEFISRISEDPLAEICFDAMIESIVKTVYSMIPLVGEVREILLSGRVSRNPVVKD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YIEDKLGDLTSIRAMKGLPDASIVKETAQGYAVIADGIAGGVFKELVDHVGIRSARGTSL HHHHHHCCHHHHHHHCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCC DYIVHPRFMKSKLGKKFAELRRLMHGEAFNIRWWSSLGSN EEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCC >Mature Secondary Structure PRVLGMDPGSKSIDICGLCDGRICFEKSIDTVEASKNPLRVVELVEGFPGVDLIALPSG CCEECCCCCCCCEEEEECCCCCEEHHCCCCHHHCCCCCHHHHHHHCCCCCCEEEEECCC YGVELTYLDHIEDNMLEDWYYTFILATTKEEIVEGLNRNNIGAFIYDAMGKIVRELKKRR CCEEEEEHHHHHHHHHHHHEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VRGIFIPAVINLETIPLHRKLNKIDMGTADKLAVAVLGIHEVSQEHKIPYDRVNYIHVEM HCEEEEEEEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE GFGYNAVIAVRNGVIVDGVGGTLMPGPAFLTSGALDLEVVQAVGLFSKTDVFSTGCNVLT CCCCEEEEEEECCEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCHHCCHHHHHCCHHHC NTMSPEEFISRISEDPLAEICFDAMIESIVKTVYSMIPLVGEVREILLSGRVSRNPVVKD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YIEDKLGDLTSIRAMKGLPDASIVKETAQGYAVIADGIAGGVFKELVDHVGIRSARGTSL HHHHHHCCHHHHHHHCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCC DYIVHPRFMKSKLGKKFAELRRLMHGEAFNIRWWSSLGSN EEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA