Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883503

Identifier: 218883503

GI number: 218883503

Start: 179629

End: 180789

Strand: Reverse

Name: 218883503

Synonym: DKAM_0190

Alternate gene names: NA

Gene position: 180789-179629 (Counterclockwise)

Preceding gene: 218883504

Following gene: 218883500

Centisome position: 13.24

GC content: 40.91

Gene sequence:

>1161_bases
ATGCAAACAATAGAATATGTGTTTCTAGGTTTTCTAATCTCGAAGATCGCTGGACACATGGCACGTAGACTAAATATAAA
CGAGGTAACTGGTTATTTAGCAACAGCTATTCTACTTGGATTAACCCTGGGTAAGGGCGAGTATATACGTGATCTAATGC
TTATCTCAAATGTGGCAGCTATATTTGTAGTATTCTATGCAGGTGTTTCGAGTGATCTAGAGACTATAATCGAGAATTTC
AAGTCATCAACAATGGTCTCACTGCTCTCCGTAGCCTTCACTATGGCATTCGTTTTACTGGCTGTAACATATATTGGATT
CTCCCTGGAGTTAGCATTCATTATTGCACTATTATTATCTAACACCGCGACTGAAACAGTATCTATGATTATAAAGAGGC
TCCCCATACACATCAGGTCGATACTGGTCTCGGCAAGCTTCGTTGATGACCTCTTCATGTTGTTTACCACGTCTGCATAC
TATATCTGGTATGTAACGGGGAACGTCAGTAATGTTGCACTACCAATACTGGTTTCTATGGCGCTCACGATACTGGTCTT
CACATTATTATCGAGGCGGCGGAGCATCCTTAAAAACATGTTTATCTATATGTCTAGGGACATAGCGTTTTTCACTGATA
TAGCATTGCTACTATTATCACTAATGCTACTAGTAGCCTATGTCTCCGGTGTAAGTCCCTTTATAGCTGCTTATCTAGCT
GGAATATTCATCTCGGGAGGAATATGGATACATGACCCCATGTTAAGATATAGAACCAGGATAAATGATTTCACCAATAT
ATTGAGTACCATAATAGATGGTGTCTTCACCCCCTTATTCATGCTATATGTAGGGCTCCATATAACAGTATCAGCCGTCA
ACACGTTACTCTTCATCTTGCTTCTAGCCATAGGATTATCTGTTAAAACGGTAGTGTATTTCTTATTCTTCAAGCTTCGT
GGTGAAGAAACATTTACAAGCCTGGTTGCAGGGGCATCAATGACGGGAAGGGGGGTATTAGAGCTAACCCTGCTGGTTAA
GGGCTTTGAACTAGGGGTTGTATCACTAGAGATATTTAACACCGTGGTGGCTGTTGCCCTCTCCACTATCGCTGCTTCAA
TAATACTTGTAGCCTTATTATCTAGGAGAGGATTCAGCTAG

Upstream 100 bases:

>100_bases
GGGGTGTAAAGCAACTGCCAGGGGTTTAGGGCTTGTTTTTAATTGGGCAAGGCTTAAAAGCTATTCTATAAGCAGTATAA
TATACGGTGGCACCGATTAA

Downstream 100 bases:

>100_bases
GCCCGTGCATTCATCCCCTTTCGAGTCATCCCTTCCAAGCCTCATCCTCGAAAATATTCAATTGGTTGCGAGTAATTTAA
TAATTTTATTCAGGTTTATT

Product: Putative Na+/H+ antiporter

Products: NA

Alternate protein names: NapA-Type Sodium/Hydrogen Antiporter; Sodium/Hydrogen Exchanger; Na(+)/H(+) Antiporter; CPA2 Family Transporter

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MQTIEYVFLGFLISKIAGHMARRLNINEVTGYLATAILLGLTLGKGEYIRDLMLISNVAAIFVVFYAGVSSDLETIIENF
KSSTMVSLLSVAFTMAFVLLAVTYIGFSLELAFIIALLLSNTATETVSMIIKRLPIHIRSILVSASFVDDLFMLFTTSAY
YIWYVTGNVSNVALPILVSMALTILVFTLLSRRRSILKNMFIYMSRDIAFFTDIALLLLSLMLLVAYVSGVSPFIAAYLA
GIFISGGIWIHDPMLRYRTRINDFTNILSTIIDGVFTPLFMLYVGLHITVSAVNTLLFILLLAIGLSVKTVVYFLFFKLR
GEETFTSLVAGASMTGRGVLELTLLVKGFELGVVSLEIFNTVVAVALSTIAASIILVALLSRRGFS

Sequences:

>Translated_386_residues
MQTIEYVFLGFLISKIAGHMARRLNINEVTGYLATAILLGLTLGKGEYIRDLMLISNVAAIFVVFYAGVSSDLETIIENF
KSSTMVSLLSVAFTMAFVLLAVTYIGFSLELAFIIALLLSNTATETVSMIIKRLPIHIRSILVSASFVDDLFMLFTTSAY
YIWYVTGNVSNVALPILVSMALTILVFTLLSRRRSILKNMFIYMSRDIAFFTDIALLLLSLMLLVAYVSGVSPFIAAYLA
GIFISGGIWIHDPMLRYRTRINDFTNILSTIIDGVFTPLFMLYVGLHITVSAVNTLLFILLLAIGLSVKTVVYFLFFKLR
GEETFTSLVAGASMTGRGVLELTLLVKGFELGVVSLEIFNTVVAVALSTIAASIILVALLSRRGFS
>Mature_386_residues
MQTIEYVFLGFLISKIAGHMARRLNINEVTGYLATAILLGLTLGKGEYIRDLMLISNVAAIFVVFYAGVSSDLETIIENF
KSSTMVSLLSVAFTMAFVLLAVTYIGFSLELAFIIALLLSNTATETVSMIIKRLPIHIRSILVSASFVDDLFMLFTTSAY
YIWYVTGNVSNVALPILVSMALTILVFTLLSRRRSILKNMFIYMSRDIAFFTDIALLLLSLMLLVAYVSGVSPFIAAYLA
GIFISGGIWIHDPMLRYRTRINDFTNILSTIIDGVFTPLFMLYVGLHITVSAVNTLLFILLLAIGLSVKTVVYFLFFKLR
GEETFTSLVAGASMTGRGVLELTLLVKGFELGVVSLEIFNTVVAVALSTIAASIILVALLSRRGFS

Specific function: Unknown

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42439; Mature: 42439

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIEYVFLGFLISKIAGHMARRLNINEVTGYLATAILLGLTLGKGEYIRDLMLISNVAA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IFVVFYAGVSSDLETIIENFKSSTMVSLLSVAFTMAFVLLAVTYIGFSLELAFIIALLLS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTATETVSMIIKRLPIHIRSILVSASFVDDLFMLFTTSAYYIWYVTGNVSNVALPILVSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
ALTILVFTLLSRRRSILKNMFIYMSRDIAFFTDIALLLLSLMLLVAYVSGVSPFIAAYLA
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GIFISGGIWIHDPMLRYRTRINDFTNILSTIIDGVFTPLFMLYVGLHITVSAVNTLLFIL
HHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAIGLSVKTVVYFLFFKLRGEETFTSLVAGASMTGRGVLELTLLVKGFELGVVSLEIFN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVVAVALSTIAASIILVALLSRRGFS
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTIEYVFLGFLISKIAGHMARRLNINEVTGYLATAILLGLTLGKGEYIRDLMLISNVAA
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IFVVFYAGVSSDLETIIENFKSSTMVSLLSVAFTMAFVLLAVTYIGFSLELAFIIALLLS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTATETVSMIIKRLPIHIRSILVSASFVDDLFMLFTTSAYYIWYVTGNVSNVALPILVSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
ALTILVFTLLSRRRSILKNMFIYMSRDIAFFTDIALLLLSLMLLVAYVSGVSPFIAAYLA
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GIFISGGIWIHDPMLRYRTRINDFTNILSTIIDGVFTPLFMLYVGLHITVSAVNTLLFIL
HHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAIGLSVKTVVYFLFFKLRGEETFTSLVAGASMTGRGVLELTLLVKGFELGVVSLEIFN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TVVAVALSTIAASIILVALLSRRGFS
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA