| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883491
Identifier: 218883491
GI number: 218883491
Start: 166560
End: 166931
Strand: Reverse
Name: 218883491
Synonym: DKAM_0178
Alternate gene names: NA
Gene position: 166931-166560 (Counterclockwise)
Preceding gene: 218883492
Following gene: 218883490
Centisome position: 12.23
GC content: 41.13
Gene sequence:
>372_bases TTGCTCGGCCCATTCAGGTATGTGTTGCTCGTGACATCTATTACAGTGGTTATTCTATTGATATCCCCGCTGATTATATT GATGCGTGATTTCGCTACCAATACATCCTGCCTATCAATCAGTGTTGACACCGGTGGACTCCGGATCCTCGACAATAATA CCTACAGGGTTTCATTAATTATTTCATATTGCTCATATATAAAGCTAAGGGACTTCAAGGTAAACCTCAGTACAACCAGT ATCTCGATCCCAGAGCTAGATAAAGGAGAGAAGAGGATAGAGATCAGCCTAGATGTTAATGAGGTCCCAAGCATCAACTA CATTGAGTTCAAAGTTCTAGGCTTATACAAGATAGTGATTAAGACAGGGTGA
Upstream 100 bases:
>100_bases AAAGGATTAAAGTCTGAGGGTAAGCCTTGTGAAGGAGAAGAGAAGAGGTCTGAAGAGAGGCCTGAGTCTAAGATGAGAGA AGAGAAGTAAGGGAAGTAGC
Downstream 100 bases:
>100_bases CCAGGCGTAATGGCTGTAGGGAAAATCGTGACCAGTATCATCAAGGGGCTTATAACCGGGTTAATATACTATGCTGTATT CGCCATCATAGTACCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLGPFRYVLLVTSITVVILLISPLIILMRDFATNTSCLSISVDTGGLRILDNNTYRVSLIISYCSYIKLRDFKVNLSTTS ISIPELDKGEKRIEISLDVNEVPSINYIEFKVLGLYKIVIKTG
Sequences:
>Translated_123_residues MLGPFRYVLLVTSITVVILLISPLIILMRDFATNTSCLSISVDTGGLRILDNNTYRVSLIISYCSYIKLRDFKVNLSTTS ISIPELDKGEKRIEISLDVNEVPSINYIEFKVLGLYKIVIKTG >Mature_123_residues MLGPFRYVLLVTSITVVILLISPLIILMRDFATNTSCLSISVDTGGLRILDNNTYRVSLIISYCSYIKLRDFKVNLSTTS ISIPELDKGEKRIEISLDVNEVPSINYIEFKVLGLYKIVIKTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13805; Mature: 13805
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGPFRYVLLVTSITVVILLISPLIILMRDFATNTSCLSISVDTGGLRILDNNTYRVSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEEE ISYCSYIKLRDFKVNLSTTSISIPELDKGEKRIEISLDVNEVPSINYIEFKVLGLYKIVI EEHHHHEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEEE KTG ECC >Mature Secondary Structure MLGPFRYVLLVTSITVVILLISPLIILMRDFATNTSCLSISVDTGGLRILDNNTYRVSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEEE ISYCSYIKLRDFKVNLSTTSISIPELDKGEKRIEISLDVNEVPSINYIEFKVLGLYKIVI EEHHHHEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEEE KTG ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA