Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is fusA2 [H]
Identifier: 218710417
GI number: 218710417
Start: 2622150
End: 2624237
Strand: Reverse
Name: fusA2 [H]
Synonym: VS_2454
Alternate gene names: 218710417
Gene position: 2624237-2622150 (Counterclockwise)
Preceding gene: 218710418
Following gene: 218710414
Centisome position: 79.54
GC content: 44.83
Gene sequence:
>2088_bases ATGGCAGATTTATCGAAATACAGAAACATTGGTATTTTCGCGCACGTTGATGCGGGTAAAACAACTACCACTGAGCGTAT CCTTAAGCTAACTGGTCAGATCCACAAGACTGGTGAAGTACATGATGGCGAATCAACTACTGACTTCATGGAACAGGAAG CTGAGCGCGGAATTACTATCCAATCAGCAGCTGTAAGCTGTTTCTGGAACGGTCACCGTCTAAACGTTATCGATACTCCT GGACACGTTGACTTCACAGTTGAAGTATACCGTTCTCTTAAAGTACTTGATGGCGGTATCGGTGTATTCTGTGGTTCTGG TGGTGTTGAACCACAATCAGAAACTAACTGGCGCTACGCTAACGAATCAGAAGTATCTCGTCTGATCTTCGTTAACAAAC TAGACCGTATGGGTGCAGATTTCTACAACGTTGTTGACCAAGTTAAAAACGTTCTAGGTGCAACTCCTCTAGTTATGGTT CTACCAATCGGCCGCGAAGATGAATTCGTGGGTGTTGTAGACCTTCTAAGCCGTAAAGCATACGTTTGGGATGACACTGG TCTTCCTGAAAACTACGAAATCACTGATGTTCCTGCGGACATGGTTGATGACGTTGAGCAATACCGTGAAGAGCTAATCG AAACTGCTGTAGAGCAAGACGATGACCTAATGGAAGCTTACATGGAAGGTGAAGAGCCTTCTATCGAAGATATCAAACGT TGTATCCGTAAAGGTACTCGTGATATTGCATTCTTCCCTACGTTCTGTGGTTCTGCGTTCAAGAACAAAGGCATGCAAGT TATCCTTGATGCTGTAGTAGATTACCTACCTTCTCCAACTGAAGTTGATCCTCAACCTCTAATGGATGAGAACGGCGAAG AAACAGGCAAGCACGCTATCGTTTCTACTGAAGAAACTTTCAAAGCGCTTGCGTTCAAAATCATGGATGACCGTTTCGGT GCTCTAACTTTCGTTCGTATTTACTCTGGTAAATTGAACAAAGGTGACACGATCCTTAACTCATTCACAGGTAAAACTGA GCGTGTTGGCCGTATGGTTGAGATGCAAGCTGATGACCGTAACGAACTAACTAGCGCACAAGCTGGTGACATCATTGCGA TCGTTGGTATGAAGAACGTTCAAACTGGTCACACTCTATGTGATCCAAAAGACCAAGTAACGCTTGAGCCAATGGTTTTC CCAACTCCAGTAATCTCTATCGCTGTATCTCCAAAAGATAAAGGCGGTTCTGAGAAAATGGGTATCGCGATCGGTAAAAT GGTTGCAGAAGATCCATCTTTCCAAGTTGAGACTGACGAAGAAACTGGCGAAACTATCCTTAAAGGTATGGGTGAGCTTC ACCTAGACATCAAGGTAGATATCCTTAAGCGTACTTACGGCGTTGACCTAACAGTTGGTGCTCCTCAAGTTGCTTACCGT GAAACTATCACTCAAGCAATTGAAGATAGCTACACGCATAAGAAACAGTCTGGTGGTTCTGGTCAATTCGGTAAGATCGA TTACCGTATTAAACCAGGTGAAGCAGGTTCTGGCTTCAAGTTCAACTCAGTAGTTGTGGGCGGTAACGTTCCTAAAGAAT TCTGGCCTGCAGTTGAGAAAGGCTTTGCTGGCATGATGGATAACGGCGTACTAGCTGGCTTCCCTACGCTAGACGTTGAA GTTGAACTTTTCGATGGTGGTTTCCACGCAGTCGATTCATCTGCTATCGCATTTGAAATCGCAGCGAAAGGCGCATTCCG TCAATCTATGCCTAAAGCTGGCGCGCAACTTCTTGAGCCTATCATGAACGTTGACGTGTTCACTCCAGACGATCACGTTG GTGATGTTATCGGTGACCTTAACCGTCGTCGTGGCATGATCAAAGATCAACAAGCTGGCGTTACTGGTGTTCGTATTAAA GCTGACGTACCTCTTTCTGAGATGTTCGGCTACATCGGTCACCTACGTACTATCACTTCTGGTCGTGGCCAATTCTCTAT GGAATTCGCACAATACGCACCATGTCCAACTAACGTTGCTGACGAAGTGATTGCAAAAGTTAAAGCAGAAAAAGAAGCTG GTAAGTAA
Upstream 100 bases:
>100_bases AGGCAAAGTTTTTTAGTCCCAAATGCATGCAAAGCTATCAGTCCTCACAGATTGTGATATACTCTGCGCGCATTTTATAT CCTATTAACAGAGTAAGACA
Downstream 100 bases:
>100_bases TTAGCCCTTTTCTAAATTAGCTAAAAAAGCCCCGCAAGTGAAAGCTTGCGGGGCTTTTTATTGTTTGTAATATACTGCGA GGTGCGAGGTGCGAGGTGCG
Product: elongation factor G
Products: NA
Alternate protein names: EF-G 2 [H]
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MADLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITIQSAAVSCFWNGHRLNVIDTP GHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSRLIFVNKLDRMGADFYNVVDQVKNVLGATPLVMV LPIGREDEFVGVVDLLSRKAYVWDDTGLPENYEITDVPADMVDDVEQYREELIETAVEQDDDLMEAYMEGEEPSIEDIKR CIRKGTRDIAFFPTFCGSAFKNKGMQVILDAVVDYLPSPTEVDPQPLMDENGEETGKHAIVSTEETFKALAFKIMDDRFG ALTFVRIYSGKLNKGDTILNSFTGKTERVGRMVEMQADDRNELTSAQAGDIIAIVGMKNVQTGHTLCDPKDQVTLEPMVF PTPVISIAVSPKDKGGSEKMGIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIKVDILKRTYGVDLTVGAPQVAYR ETITQAIEDSYTHKKQSGGSGQFGKIDYRIKPGEAGSGFKFNSVVVGGNVPKEFWPAVEKGFAGMMDNGVLAGFPTLDVE VELFDGGFHAVDSSAIAFEIAAKGAFRQSMPKAGAQLLEPIMNVDVFTPDDHVGDVIGDLNRRRGMIKDQQAGVTGVRIK ADVPLSEMFGYIGHLRTITSGRGQFSMEFAQYAPCPTNVADEVIAKVKAEKEAGK
Sequences:
>Translated_695_residues MADLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITIQSAAVSCFWNGHRLNVIDTP GHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSRLIFVNKLDRMGADFYNVVDQVKNVLGATPLVMV LPIGREDEFVGVVDLLSRKAYVWDDTGLPENYEITDVPADMVDDVEQYREELIETAVEQDDDLMEAYMEGEEPSIEDIKR CIRKGTRDIAFFPTFCGSAFKNKGMQVILDAVVDYLPSPTEVDPQPLMDENGEETGKHAIVSTEETFKALAFKIMDDRFG ALTFVRIYSGKLNKGDTILNSFTGKTERVGRMVEMQADDRNELTSAQAGDIIAIVGMKNVQTGHTLCDPKDQVTLEPMVF PTPVISIAVSPKDKGGSEKMGIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIKVDILKRTYGVDLTVGAPQVAYR ETITQAIEDSYTHKKQSGGSGQFGKIDYRIKPGEAGSGFKFNSVVVGGNVPKEFWPAVEKGFAGMMDNGVLAGFPTLDVE VELFDGGFHAVDSSAIAFEIAAKGAFRQSMPKAGAQLLEPIMNVDVFTPDDHVGDVIGDLNRRRGMIKDQQAGVTGVRIK ADVPLSEMFGYIGHLRTITSGRGQFSMEFAQYAPCPTNVADEVIAKVKAEKEAGK >Mature_694_residues ADLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITIQSAAVSCFWNGHRLNVIDTPG HVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSRLIFVNKLDRMGADFYNVVDQVKNVLGATPLVMVL PIGREDEFVGVVDLLSRKAYVWDDTGLPENYEITDVPADMVDDVEQYREELIETAVEQDDDLMEAYMEGEEPSIEDIKRC IRKGTRDIAFFPTFCGSAFKNKGMQVILDAVVDYLPSPTEVDPQPLMDENGEETGKHAIVSTEETFKALAFKIMDDRFGA LTFVRIYSGKLNKGDTILNSFTGKTERVGRMVEMQADDRNELTSAQAGDIIAIVGMKNVQTGHTLCDPKDQVTLEPMVFP TPVISIAVSPKDKGGSEKMGIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIKVDILKRTYGVDLTVGAPQVAYRE TITQAIEDSYTHKKQSGGSGQFGKIDYRIKPGEAGSGFKFNSVVVGGNVPKEFWPAVEKGFAGMMDNGVLAGFPTLDVEV ELFDGGFHAVDSSAIAFEIAAKGAFRQSMPKAGAQLLEPIMNVDVFTPDDHVGDVIGDLNRRRGMIKDQQAGVTGVRIKA DVPLSEMFGYIGHLRTITSGRGQFSMEFAQYAPCPTNVADEVIAKVKAEKEAGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=693, Percent_Identity=42.7128427128427, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI19923640, Length=711, Percent_Identity=35.7243319268636, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI25306283, Length=396, Percent_Identity=41.6666666666667, Blast_Score=276, Evalue=5e-74, Organism=Homo sapiens, GI25306287, Length=290, Percent_Identity=45.1724137931035, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI157426893, Length=159, Percent_Identity=38.9937106918239, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI4503483, Length=146, Percent_Identity=36.986301369863, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI94966754, Length=158, Percent_Identity=32.2784810126582, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI310132016, Length=122, Percent_Identity=36.0655737704918, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI310110807, Length=122, Percent_Identity=36.0655737704918, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI310123363, Length=122, Percent_Identity=36.0655737704918, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789738, Length=693, Percent_Identity=53.3910533910534, Blast_Score=738, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=500, Percent_Identity=25.6, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=36, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788922, Length=180, Percent_Identity=33.8888888888889, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17533571, Length=698, Percent_Identity=39.3982808022923, Blast_Score=491, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17556745, Length=721, Percent_Identity=30.5131761442441, Blast_Score=310, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17557151, Length=151, Percent_Identity=39.7350993377483, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17552882, Length=162, Percent_Identity=31.4814814814815, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=700, Percent_Identity=40.7142857142857, Blast_Score=526, Evalue=1e-150, Organism=Saccharomyces cerevisiae, GI6322359, Length=771, Percent_Identity=32.0363164721141, Blast_Score=346, Evalue=9e-96, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=37.2549019607843, Blast_Score=94, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6324707, Length=154, Percent_Identity=36.3636363636364, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6320593, Length=154, Percent_Identity=36.3636363636364, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=179, Percent_Identity=29.608938547486, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24582462, Length=694, Percent_Identity=40.2017291066282, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI221458488, Length=735, Percent_Identity=32.9251700680272, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI78706572, Length=158, Percent_Identity=37.9746835443038, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI28574573, Length=171, Percent_Identity=33.9181286549708, Blast_Score=87, Evalue=6e-17, Organism=Drosophila melanogaster, GI24585709, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24585711, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24585713, Length=151, Percent_Identity=36.4238410596026, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 76068; Mature: 75937
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITI CCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEE QSAAVSCFWNGHRLNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYA EEEEEEEEECCEEEEEEECCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC NESEVSRLIFVNKLDRMGADFYNVVDQVKNVLGATPLVMVLPIGREDEFVGVVDLLSRKA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCC YVWDDTGLPENYEITDVPADMVDDVEQYREELIETAVEQDDDLMEAYMEGEEPSIEDIKR EEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH CIRKGTRDIAFFPTFCGSAFKNKGMQVILDAVVDYLPSPTEVDPQPLMDENGEETGKHAI HHHCCCCCEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VSTEETFKALAFKIMDDRFGALTFVRIYSGKLNKGDTILNSFTGKTERVGRMVEMQADDR EECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHCCEEEECCCCC NELTSAQAGDIIAIVGMKNVQTGHTLCDPKDQVTLEPMVFPTPVISIAVSPKDKGGSEKM HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEECCCCEEEEEECCCCCCCCCCH GIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIKVDILKRTYGVDLTVGAPQVAYR HHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEEEHHHCCCEEEECCCHHHHH ETITQAIEDSYTHKKQSGGSGQFGKIDYRIKPGEAGSGFKFNSVVVGGNVPKEFWPAVEK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEECEEEECCCCCHHHHHHHHH GFAGMMDNGVLAGFPTLDVEVELFDGGFHAVDSSAIAFEIAAKGAFRQSMPKAGAQLLEP CCCCCCCCCEEECCCCEEEEEEEECCCCEECCCCCEEEEEHHCCHHHHHCCHHHHHHHHH IMNVDVFTPDDHVGDVIGDLNRRRGMIKDQQAGVTGVRIKADVPLSEMFGYIGHLRTITS HHCCEEECCCHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCC GRGQFSMEFAQYAPCPTNVADEVIAKVKAEKEAGK CCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITI CCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEE QSAAVSCFWNGHRLNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYA EEEEEEEEECCEEEEEEECCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC NESEVSRLIFVNKLDRMGADFYNVVDQVKNVLGATPLVMVLPIGREDEFVGVVDLLSRKA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCC YVWDDTGLPENYEITDVPADMVDDVEQYREELIETAVEQDDDLMEAYMEGEEPSIEDIKR EEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH CIRKGTRDIAFFPTFCGSAFKNKGMQVILDAVVDYLPSPTEVDPQPLMDENGEETGKHAI HHHCCCCCEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VSTEETFKALAFKIMDDRFGALTFVRIYSGKLNKGDTILNSFTGKTERVGRMVEMQADDR EECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHCCEEEECCCCC NELTSAQAGDIIAIVGMKNVQTGHTLCDPKDQVTLEPMVFPTPVISIAVSPKDKGGSEKM HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEECCCCEEEEEECCCCCCCCCCH GIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIKVDILKRTYGVDLTVGAPQVAYR HHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCEEEEEEEEEEHHHCCCEEEECCCHHHHH ETITQAIEDSYTHKKQSGGSGQFGKIDYRIKPGEAGSGFKFNSVVVGGNVPKEFWPAVEK HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEECEEEECCCCCHHHHHHHHH GFAGMMDNGVLAGFPTLDVEVELFDGGFHAVDSSAIAFEIAAKGAFRQSMPKAGAQLLEP CCCCCCCCCEEECCCCEEEEEEEECCCCEECCCCCEEEEEHHCCHHHHHCCHHHHHHHHH IMNVDVFTPDDHVGDVIGDLNRRRGMIKDQQAGVTGVRIKADVPLSEMFGYIGHLRTITS HHCCEEECCCHHHHHHHHHHHHHCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCC GRGQFSMEFAQYAPCPTNVADEVIAKVKAEKEAGK CCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA