Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710402
Identifier: 218710402
GI number: 218710402
Start: 2610683
End: 2611177
Strand: Reverse
Name: 218710402
Synonym: VS_2439
Alternate gene names: NA
Gene position: 2611177-2610683 (Counterclockwise)
Preceding gene: 218710403
Following gene: 218710401
Centisome position: 79.14
GC content: 43.23
Gene sequence:
>495_bases GTGATGAAACGGTACAAAGGGCGTATTAAAGGCATCGCTATTATCGAATTTACCATAGTGTCTTGGCTAGTCTTTCTCTT GGTCTTCCTTATTTTAGCGCTGGGTGCTTACATATTTTCGCTTCAAATGGTCAGTGAAGCGACCAGAAAGGCAGCAAGGT TAGCCACGGTTTGCTACGTTGCTGATAGGGACAATATCGCGGGAATGGTTGTTGCTGATCTTCCTCTTGTTGGTTTTACC GCGGCGAATTTGGAAGTTGCATATTTAGATGTGAGTGGGAATGAAATTACATCTGGTTATGATACGGATCCTGTCTTTAG TAGCATTAAATTTGTAAGGGCACGAGCGACAGGGTACGGAATTCAATTAATTGATAATTTGAGTTTTTTAGGTACGAGTG GTTACTTGGCTGCTCCCTCATTTGAAACCATCTTACCTGCAGAAAGTTTAGGTGTGGTAAGGGCGGACTCCGAAACTCGG AATCGGTGTCCATAA
Upstream 100 bases:
>100_bases TGAGTGTGACCTACAATTATATTCCTCACTTTGTGTCGATCCCGTTTTCTTCGGCGAGCTTTTCTATTCCGATTAGTGTC TCTTCGATAATGAGGGTGTT
Downstream 100 bases:
>100_bases GTTATTTTATACAGGAGTAGCGGTATGGGGGAAGCGATCAAAATCACGCCTAATGAGAACGATATTACGCGTTTGAGAAC AAACCTAAAAGTCTGGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MMKRYKGRIKGIAIIEFTIVSWLVFLLVFLILALGAYIFSLQMVSEATRKAARLATVCYVADRDNIAGMVVADLPLVGFT AANLEVAYLDVSGNEITSGYDTDPVFSSIKFVRARATGYGIQLIDNLSFLGTSGYLAAPSFETILPAESLGVVRADSETR NRCP
Sequences:
>Translated_164_residues MMKRYKGRIKGIAIIEFTIVSWLVFLLVFLILALGAYIFSLQMVSEATRKAARLATVCYVADRDNIAGMVVADLPLVGFT AANLEVAYLDVSGNEITSGYDTDPVFSSIKFVRARATGYGIQLIDNLSFLGTSGYLAAPSFETILPAESLGVVRADSETR NRCP >Mature_164_residues MMKRYKGRIKGIAIIEFTIVSWLVFLLVFLILALGAYIFSLQMVSEATRKAARLATVCYVADRDNIAGMVVADLPLVGFT AANLEVAYLDVSGNEITSGYDTDPVFSSIKFVRARATGYGIQLIDNLSFLGTSGYLAAPSFETILPAESLGVVRADSETR NRCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17828; Mature: 17828
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRYKGRIKGIAIIEFTIVSWLVFLLVFLILALGAYIFSLQMVSEATRKAARLATVCYV CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE ADRDNIAGMVVADLPLVGFTAANLEVAYLDVSGNEITSGYDTDPVFSSIKFVRARATGYG ECCCCCCEEEEECCCEEEEEECCEEEEEEEECCCEECCCCCCCHHHHHHHHHHHHCCCCC IQLIDNLSFLGTSGYLAAPSFETILPAESLGVVRADSETRNRCP EEEECCCCEECCCCCEECCCCHHHCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MMKRYKGRIKGIAIIEFTIVSWLVFLLVFLILALGAYIFSLQMVSEATRKAARLATVCYV CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE ADRDNIAGMVVADLPLVGFTAANLEVAYLDVSGNEITSGYDTDPVFSSIKFVRARATGYG ECCCCCCEEEEECCCEEEEEECCEEEEEEEECCCEECCCCCCCHHHHHHHHHHHHCCCCC IQLIDNLSFLGTSGYLAAPSFETILPAESLGVVRADSETRNRCP EEEECCCCEECCCCCEECCCCHHHCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA