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The map label for this gene is tfoX [H]

Identifier: 218709817

GI number: 218709817

Start: 1969678

End: 1970259

Strand: Reverse

Name: tfoX [H]

Synonym: VS_1829

Alternate gene names: 218709817

Gene position: 1970259-1969678 (Counterclockwise)

Preceding gene: 218709823

Following gene: 218709813

Centisome position: 59.72

GC content: 40.21

Gene sequence:

>582_bases
ATGACCGAGACAGCATTTATTAATTACGTGAATCAATTTGGTGAACATCAAAAGCGCTCTATGTTTGGAGGTATTGGCCT
CTTTCAAAATGACGCTATGTTCGCTTTGTTGAGTGAAGATTGTGTATTCATTCGAGGTGGGAACTTATTAGATAAAAAGC
TGACGGGGCTTGATTGTGAAAAGTATCGTCACGTAAAAAAGCAGACGACAGCAACCGTGAATTACTACGACATCACGGAT
CTCTTTACGTCTGAGCATCCTGAATTGGATAGTATTATTCGTACTTCAATCGATAATTCAATTCAGCAGCGTAGCTTCAA
AAAATCATCTGCTAGCCGTAGATTAAGGGATTTGCCTAACATGCAACTGACGTTAGAACGCATGGTTAAAAAGGCTGGAG
TGGATGATGTTTCAATGTTTATGCAGTTGGGTGCATCTGAAGTGTTTAATAAGGTTCGCGAAGCGTACGGAAACGATGTT
GACCTAAAATTACTTTGGAAGTTTGCGGGTGCAATTGATGGTATTCACTGGAAACTATTACAAGAGCCACGCAAGCAGCA
ATTATTAAAGAGCTGCCACTAA

Upstream 100 bases:

>100_bases
TATTCACCTAAACATTAAATAGATTTAAAATTTTTCGCATAAAAAGCTGCTTGTCTGGCGATCAACCTAATCGGGGTAAT
TTGATTAAGGATCAACGGAT

Downstream 100 bases:

>100_bases
AGATATCGCCTGTATATGCATAAGATTACTGTTTATATATAAAAACCGAGGGATTTCCTCGGTTTTTTGTTTCTATCTAG
CCCGTTTTAAAGGCTAAGCC

Product: DNA transformation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTETAFINYVNQFGEHQKRSMFGGIGLFQNDAMFALLSEDCVFIRGGNLLDKKLTGLDCEKYRHVKKQTTATVNYYDITD
LFTSEHPELDSIIRTSIDNSIQQRSFKKSSASRRLRDLPNMQLTLERMVKKAGVDDVSMFMQLGASEVFNKVREAYGNDV
DLKLLWKFAGAIDGIHWKLLQEPRKQQLLKSCH

Sequences:

>Translated_193_residues
MTETAFINYVNQFGEHQKRSMFGGIGLFQNDAMFALLSEDCVFIRGGNLLDKKLTGLDCEKYRHVKKQTTATVNYYDITD
LFTSEHPELDSIIRTSIDNSIQQRSFKKSSASRRLRDLPNMQLTLERMVKKAGVDDVSMFMQLGASEVFNKVREAYGNDV
DLKLLWKFAGAIDGIHWKLLQEPRKQQLLKSCH
>Mature_192_residues
TETAFINYVNQFGEHQKRSMFGGIGLFQNDAMFALLSEDCVFIRGGNLLDKKLTGLDCEKYRHVKKQTTATVNYYDITDL
FTSEHPELDSIIRTSIDNSIQQRSFKKSSASRRLRDLPNMQLTLERMVKKAGVDDVSMFMQLGASEVFNKVREAYGNDVD
LKLLWKFAGAIDGIHWKLLQEPRKQQLLKSCH

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=186, Percent_Identity=28.494623655914, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 22176; Mature: 22045

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAFINYVNQFGEHQKRSMFGGIGLFQNDAMFALLSEDCVFIRGGNLLDKKLTGLDCE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCEEEEECCCCHHHHHCCCCHH
KYRHVKKQTTATVNYYDITDLFTSEHPELDSIIRTSIDNSIQQRSFKKSSASRRLRDLPN
HHHHHHHHHHHEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MQLTLERMVKKAGVDDVSMFMQLGASEVFNKVREAYGNDVDLKLLWKFAGAIDGIHWKLL
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
QEPRKQQLLKSCH
HCHHHHHHHHHCC
>Mature Secondary Structure 
TETAFINYVNQFGEHQKRSMFGGIGLFQNDAMFALLSEDCVFIRGGNLLDKKLTGLDCE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCEEEEECCCCHHHHHCCCCHH
KYRHVKKQTTATVNYYDITDLFTSEHPELDSIIRTSIDNSIQQRSFKKSSASRRLRDLPN
HHHHHHHHHHHEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MQLTLERMVKKAGVDDVSMFMQLGASEVFNKVREAYGNDVDLKLLWKFAGAIDGIHWKLL
HHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
QEPRKQQLLKSCH
HCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]