| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709361
Identifier: 218709361
GI number: 218709361
Start: 1478135
End: 1479223
Strand: Direct
Name: 218709361
Synonym: VS_1370
Alternate gene names: NA
Gene position: 1478135-1479223 (Clockwise)
Preceding gene: 218709360
Following gene: 218709362
Centisome position: 44.8
GC content: 42.24
Gene sequence:
>1089_bases ATGAAGCTGACTCTCAACTTGGGCTCACTGATGACAGCTATCAATATCATGCAACCCGAGAAAAAAGGTTCCTTCAACTT GGCCTATGAAGAAACGAATATAGCGAAAGTAGATAAAGAATTAGAGCAAGGAAAAGATGTAGAGCTTAAAGATGTAGAAA TTGAATCAGGTCTTTTAAGTTACCAAGGACGAAATGTCAGCCTATACATCAAGGCTAACGGTTCGAGTGCTCGTTTCCAC GTCTCTGATTGTAAAACTCTTCAATCGATGAGAGCCAATGGACGCTTTGAACGCTATGTAGTGACGAACAATACCTCAGG GGAGTTTGTTGTTGACTCTGGTTATGGAGAAACCAAAGCTAGACTGAAAGTCTGCCAGAACTGCTTGAGAAAGCTTAACT ATAGAGGTTGTAACTCTTCCAACGACATTCGCTCAATAGTTGTTGAATTTAACATGGCAGAATTCTTTGCGACATATAGC TCGTTTTTCCCACATATGCCTTCTAGAAGCGCAGAAACGGCAGAGACAGGATATACCGACGACTGGTCTAGAGTGTCTTC ACGTTATCGCGTAGACAAGAACTTTAAATGTGAGGACTGTAAGGTGAACTTGCGCACGAACCGTTCACTACTGCATGTGC ATCACATCAATGGCGTTAAATCAGATAACAATGAGGAAAACCTAAGATCTCTATGTATCGACTGCCACAGTAAACAACCG AAACATCAACACATGGTTTTGAGCCACCGAGAAAGACAATTGATTAACGATCTTCGCAAGGATCAAGGCCTTTTGGATGA CCTTGGAGGTTGGCAAGAGCTTTTCGAGTTATCAGACCCTGGCGTGCATGGTGTATTACATGCTTGTCGTGAAGTGCACC TATTGCTGCCGGAAGTTAATTACTATGTGATGGATAGTTTGGGTGATATAGCTTCTCGTATTGAGCTAGCTTGGCCTAAA AGTCGGTTTGGCGTAGCGATTTCACCAAATGATATCAATGATGCGCTGAAACAAGGTTGGCAAGTAATAACAATAAATGA GTTTCTGAGTGATTATAGAAGCCATGCTCACACGTTGAGGCATCTATGA
Upstream 100 bases:
>100_bases TAGATGTAGCTGGTGTAGAAGATGAAAAACGCTCACGTAGAGTGTCTTTCCGAATCATTACCAATGCTGAACAACAGATA CTCAAGATTTTGGGGACAGA
Downstream 100 bases:
>100_bases TGAAGATGCGATTAGATCAAGTGTTAGAGCGAATTATTTCAGTCAATCACGCATGGAAGCTATCTAAAGAGGAGTTTGGA GCCGACTTCATTGCTACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKLTLNLGSLMTAINIMQPEKKGSFNLAYEETNIAKVDKELEQGKDVELKDVEIESGLLSYQGRNVSLYIKANGSSARFH VSDCKTLQSMRANGRFERYVVTNNTSGEFVVDSGYGETKARLKVCQNCLRKLNYRGCNSSNDIRSIVVEFNMAEFFATYS SFFPHMPSRSAETAETGYTDDWSRVSSRYRVDKNFKCEDCKVNLRTNRSLLHVHHINGVKSDNNEENLRSLCIDCHSKQP KHQHMVLSHRERQLINDLRKDQGLLDDLGGWQELFELSDPGVHGVLHACREVHLLLPEVNYYVMDSLGDIASRIELAWPK SRFGVAISPNDINDALKQGWQVITINEFLSDYRSHAHTLRHL
Sequences:
>Translated_362_residues MKLTLNLGSLMTAINIMQPEKKGSFNLAYEETNIAKVDKELEQGKDVELKDVEIESGLLSYQGRNVSLYIKANGSSARFH VSDCKTLQSMRANGRFERYVVTNNTSGEFVVDSGYGETKARLKVCQNCLRKLNYRGCNSSNDIRSIVVEFNMAEFFATYS SFFPHMPSRSAETAETGYTDDWSRVSSRYRVDKNFKCEDCKVNLRTNRSLLHVHHINGVKSDNNEENLRSLCIDCHSKQP KHQHMVLSHRERQLINDLRKDQGLLDDLGGWQELFELSDPGVHGVLHACREVHLLLPEVNYYVMDSLGDIASRIELAWPK SRFGVAISPNDINDALKQGWQVITINEFLSDYRSHAHTLRHL >Mature_362_residues MKLTLNLGSLMTAINIMQPEKKGSFNLAYEETNIAKVDKELEQGKDVELKDVEIESGLLSYQGRNVSLYIKANGSSARFH VSDCKTLQSMRANGRFERYVVTNNTSGEFVVDSGYGETKARLKVCQNCLRKLNYRGCNSSNDIRSIVVEFNMAEFFATYS SFFPHMPSRSAETAETGYTDDWSRVSSRYRVDKNFKCEDCKVNLRTNRSLLHVHHINGVKSDNNEENLRSLCIDCHSKQP KHQHMVLSHRERQLINDLRKDQGLLDDLGGWQELFELSDPGVHGVLHACREVHLLLPEVNYYVMDSLGDIASRIELAWPK SRFGVAISPNDINDALKQGWQVITINEFLSDYRSHAHTLRHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41322; Mature: 41322
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTLNLGSLMTAINIMQPEKKGSFNLAYEETNIAKVDKELEQGKDVELKDVEIESGLLS CEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHE YQGRNVSLYIKANGSSARFHVSDCKTLQSMRANGRFERYVVTNNTSGEFVVDSGYGETKA ECCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCHHH RLKVCQNCLRKLNYRGCNSSNDIRSIVVEFNMAEFFATYSSFFPHMPSRSAETAETGYTD HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DWSRVSSRYRVDKNFKCEDCKVNLRTNRSLLHVHHINGVKSDNNEENLRSLCIDCHSKQP CHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC KHQHMVLSHRERQLINDLRKDQGLLDDLGGWQELFELSDPGVHGVLHACREVHLLLPEVN CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC YYVMDSLGDIASRIELAWPKSRFGVAISPNDINDALKQGWQVITINEFLSDYRSHAHTLR HHHHHHHHHHHHHHEECCCCCCCCEEECCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHH HL CC >Mature Secondary Structure MKLTLNLGSLMTAINIMQPEKKGSFNLAYEETNIAKVDKELEQGKDVELKDVEIESGLLS CEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHE YQGRNVSLYIKANGSSARFHVSDCKTLQSMRANGRFERYVVTNNTSGEFVVDSGYGETKA ECCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCHHH RLKVCQNCLRKLNYRGCNSSNDIRSIVVEFNMAEFFATYSSFFPHMPSRSAETAETGYTD HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DWSRVSSRYRVDKNFKCEDCKVNLRTNRSLLHVHHINGVKSDNNEENLRSLCIDCHSKQP CHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC KHQHMVLSHRERQLINDLRKDQGLLDDLGGWQELFELSDPGVHGVLHACREVHLLLPEVN CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC YYVMDSLGDIASRIELAWPKSRFGVAISPNDINDALKQGWQVITINEFLSDYRSHAHTLR HHHHHHHHHHHHHHEECCCCCCCCEEECCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHH HL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA