| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709279
Identifier: 218709279
GI number: 218709279
Start: 1382844
End: 1383848
Strand: Direct
Name: 218709279
Synonym: VS_1286
Alternate gene names: NA
Gene position: 1382844-1383848 (Clockwise)
Preceding gene: 218709278
Following gene: 218709280
Centisome position: 41.91
GC content: 44.98
Gene sequence:
>1005_bases ATGGATCCTTTAACGCAGGGCGTGTTAGGCGCTTCTTTGTCACAATCGGCAAGCAAAAAACAACATTTGGTTGTTGCTGG GGTATTAGGGCTGCTTTCTGGATTGGCACCAGATCTAGATGCACTGATTAAGTCTCAAAGTGACCCTTTGTTGGCGTTGG AATTTCATCGACAATTTACCCATTCACTCTTCTTTATCCCCATTGGCAGTTTGATATGTGCCTTGGTTCTGCATCACCTG ATTGCAAAAAGGCGTGGGCTTTCTTTCAAACAAAGCTGGCTGTTTTGCGCTCTGGGCTATGGCACTCATGCACTGTTAGA CGCTTGTACCACTTATGGCACGCAGTTACTTTGGCCTTTGACTAATGCGCGTTTTGCTTGGAATACCATATCAATCATCG ATCCTGTTTATACGCTGCCCATCCTAGTTTTGCTTGTGTTTGCAACGTTGAAACGAGCACCTTGGCTAGCACGTGTTGCG TTTGCTTGGGCTCTAATTTATCCAACATTAGGGATGATACAAAGAGATAGGGCAGAGGCGATTGGGTGGCAATTAGCGGA ACAAAGACAACACACGCCGATTCGATTAGAGGCAAAACCGAGCTTTGCGAATATCTTGGTTTGGAAAGTGGTGTACGAAA CAGAGGCTCATTATCATGTAGACGCAGTGCGGGTTGGCACATCGGTAAACGTATATCCAGGAGAGTCGATCGCTAAGCTG AATGTTAGCAGGGACTTACCTTGGCTTGACCCTAATTCACAACAAGCAAAAGATATTGAACGCTTCCGCTGGTTCTCTAA TGGTTATATTGCTCAGGACCCAACGGACGAGTTGCGTATTATCGACGTCCGATACTCAATTGTACCGAATCAAATGAAAG CACTTTGGAGTATCAAGTTATCAAAATCTGTTGATGCCAATTCGCATATAAAATACGAAACTCATCGAGACAACACCCCA GAGTCGAGACAGATCTTCTTCGATATGCTCACTGGCGATAAATGA
Upstream 100 bases:
>100_bases AACAGTATTATCTTGATAAAACATTGTTATTTAACCCAATTCACTGCTATAGCTAAATGTATCTTGTTTGATTCAACGGA ATGCTATCAATGAGTGATTT
Downstream 100 bases:
>100_bases TCTAGTTCTAAACAGTAAAAAGGCTGAGTCAGATAAGCTGCTCAGCCTTTTTTATTCGTTTGTTTAACAGGTCGATGTTG TATTGATCTGCACCATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Bound Metal-Dependent Hydrolase Family Protein; Integral Membrane Protein; Transmembrane Metal-Dependent Hydrolase; Membrane Bound Hydrolase; Membrane-Bound Metal-Dependent Hydrolase Family
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP ESRQIFFDMLTGDK
Sequences:
>Translated_334_residues MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP ESRQIFFDMLTGDK >Mature_334_residues MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP ESRQIFFDMLTGDK
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37673; Mature: 37673
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHHH HSLFFIPIGSLICALVLHHLIAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCHHHHHHHHHHHCCEEEEEC TNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVAFAWALIYPTLGMIQRDRAEA CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL HHHHHHHHCCCCCEEEEECCCHHHEEEEEEEEECCCCEEEEEEEECCEEEECCCCCEEEE NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKL ECCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEEEECCHHHHHHHHEEE SKSVDANSHIKYETHRDNTPESRQIFFDMLTGDK CCCCCCCCCEEEEECCCCCCHHHHEEEEECCCCC >Mature Secondary Structure MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHHH HSLFFIPIGSLICALVLHHLIAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCHHHHHHHHHHHCCEEEEEC TNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVAFAWALIYPTLGMIQRDRAEA CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL HHHHHHHHCCCCCEEEEECCCHHHEEEEEEEEECCCCEEEEEEEECCEEEECCCCCEEEE NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKL ECCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEEEECCHHHHHHHHEEE SKSVDANSHIKYETHRDNTPESRQIFFDMLTGDK CCCCCCCCCEEEEECCCCCCHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA