Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709279

Identifier: 218709279

GI number: 218709279

Start: 1382844

End: 1383848

Strand: Direct

Name: 218709279

Synonym: VS_1286

Alternate gene names: NA

Gene position: 1382844-1383848 (Clockwise)

Preceding gene: 218709278

Following gene: 218709280

Centisome position: 41.91

GC content: 44.98

Gene sequence:

>1005_bases
ATGGATCCTTTAACGCAGGGCGTGTTAGGCGCTTCTTTGTCACAATCGGCAAGCAAAAAACAACATTTGGTTGTTGCTGG
GGTATTAGGGCTGCTTTCTGGATTGGCACCAGATCTAGATGCACTGATTAAGTCTCAAAGTGACCCTTTGTTGGCGTTGG
AATTTCATCGACAATTTACCCATTCACTCTTCTTTATCCCCATTGGCAGTTTGATATGTGCCTTGGTTCTGCATCACCTG
ATTGCAAAAAGGCGTGGGCTTTCTTTCAAACAAAGCTGGCTGTTTTGCGCTCTGGGCTATGGCACTCATGCACTGTTAGA
CGCTTGTACCACTTATGGCACGCAGTTACTTTGGCCTTTGACTAATGCGCGTTTTGCTTGGAATACCATATCAATCATCG
ATCCTGTTTATACGCTGCCCATCCTAGTTTTGCTTGTGTTTGCAACGTTGAAACGAGCACCTTGGCTAGCACGTGTTGCG
TTTGCTTGGGCTCTAATTTATCCAACATTAGGGATGATACAAAGAGATAGGGCAGAGGCGATTGGGTGGCAATTAGCGGA
ACAAAGACAACACACGCCGATTCGATTAGAGGCAAAACCGAGCTTTGCGAATATCTTGGTTTGGAAAGTGGTGTACGAAA
CAGAGGCTCATTATCATGTAGACGCAGTGCGGGTTGGCACATCGGTAAACGTATATCCAGGAGAGTCGATCGCTAAGCTG
AATGTTAGCAGGGACTTACCTTGGCTTGACCCTAATTCACAACAAGCAAAAGATATTGAACGCTTCCGCTGGTTCTCTAA
TGGTTATATTGCTCAGGACCCAACGGACGAGTTGCGTATTATCGACGTCCGATACTCAATTGTACCGAATCAAATGAAAG
CACTTTGGAGTATCAAGTTATCAAAATCTGTTGATGCCAATTCGCATATAAAATACGAAACTCATCGAGACAACACCCCA
GAGTCGAGACAGATCTTCTTCGATATGCTCACTGGCGATAAATGA

Upstream 100 bases:

>100_bases
AACAGTATTATCTTGATAAAACATTGTTATTTAACCCAATTCACTGCTATAGCTAAATGTATCTTGTTTGATTCAACGGA
ATGCTATCAATGAGTGATTT

Downstream 100 bases:

>100_bases
TCTAGTTCTAAACAGTAAAAAGGCTGAGTCAGATAAGCTGCTCAGCCTTTTTTATTCGTTTGTTTAACAGGTCGATGTTG
TATTGATCTGCACCATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Bound Metal-Dependent Hydrolase Family Protein; Integral Membrane Protein; Transmembrane Metal-Dependent Hydrolase; Membrane Bound Hydrolase; Membrane-Bound Metal-Dependent Hydrolase Family

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL
IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA
FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL
NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP
ESRQIFFDMLTGDK

Sequences:

>Translated_334_residues
MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL
IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA
FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL
NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP
ESRQIFFDMLTGDK
>Mature_334_residues
MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFTHSLFFIPIGSLICALVLHHL
IAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPLTNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVA
FAWALIYPTLGMIQRDRAEAIGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL
NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKLSKSVDANSHIKYETHRDNTP
ESRQIFFDMLTGDK

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37673; Mature: 37673

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHHH
HSLFFIPIGSLICALVLHHLIAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCHHHHHHHHHHHCCEEEEEC
TNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVAFAWALIYPTLGMIQRDRAEA
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL
HHHHHHHHCCCCCEEEEECCCHHHEEEEEEEEECCCCEEEEEEEECCEEEECCCCCEEEE
NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKL
ECCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEEEECCHHHHHHHHEEE
SKSVDANSHIKYETHRDNTPESRQIFFDMLTGDK
CCCCCCCCCEEEEECCCCCCHHHHEEEEECCCCC
>Mature Secondary Structure
MDPLTQGVLGASLSQSASKKQHLVVAGVLGLLSGLAPDLDALIKSQSDPLLALEFHRQFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHHHHH
HSLFFIPIGSLICALVLHHLIAKRRGLSFKQSWLFCALGYGTHALLDACTTYGTQLLWPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCHHHHHHHHHHHCCEEEEEC
TNARFAWNTISIIDPVYTLPILVLLVFATLKRAPWLARVAFAWALIYPTLGMIQRDRAEA
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGWQLAEQRQHTPIRLEAKPSFANILVWKVVYETEAHYHVDAVRVGTSVNVYPGESIAKL
HHHHHHHHCCCCCEEEEECCCHHHEEEEEEEEECCCCEEEEEEEECCEEEECCCCCEEEE
NVSRDLPWLDPNSQQAKDIERFRWFSNGYIAQDPTDELRIIDVRYSIVPNQMKALWSIKL
ECCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEEEECCHHHHHHHHEEE
SKSVDANSHIKYETHRDNTPESRQIFFDMLTGDK
CCCCCCCCCEEEEECCCCCCHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA