Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
---|---|
Accession | NC_011753 |
Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709266
Identifier: 218709266
GI number: 218709266
Start: 1371339
End: 1371719
Strand: Direct
Name: 218709266
Synonym: VS_1273
Alternate gene names: NA
Gene position: 1371339-1371719 (Clockwise)
Preceding gene: 218709265
Following gene: 218709267
Centisome position: 41.56
GC content: 41.47
Gene sequence:
>381_bases ATGAATTACGATGAGTTTAACCATTTTTGCGGGACATTTACTGGGACGAGTCATGTCGTTCAATGGGGCAATTCAGATGT CTGGAAGGTGGGTGGTAAAGTCTTTGCCATTGGTGGTTGGAGTGATGGCAAAAAAGCGGCATTTACTTTTAAGACATCCA ACTTAAATTACGATTTTCTCAGTGATTGTGAGGGTTATAAACCGGCTCCGTACTTTGCTAACCGTGGGATGAAATGGATA CAGCAAGTTGAAACTTCCGGTCAATTAGACGATGACCTTAAGTATTACTTGTCTGAGTCTTATCGTATTGTTGCTAGTGG TTTAAGTAAACGTAAACAACGAGAGTTGGGCATAGAACACCTATCTGAACCACGCACGTAA
Upstream 100 bases:
>100_bases TAGAGTACAAGCGAATATTAGGTAGGGAAGTCGATCTAATTGACATACAAGAACTGACGTTAGACATTTAATCCGAGGTT GTGTGCATAAGGAAATGAGT
Downstream 100 bases:
>100_bases ATGCTTCAAGGTAGATTTCGGCGTTGACGTAATACTTTTTAATCTTTATCGACAGGCCAGTAGCCCTATGGAAGATCCTG ACGACGAGATTAATCAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNYDEFNHFCGTFTGTSHVVQWGNSDVWKVGGKVFAIGGWSDGKKAAFTFKTSNLNYDFLSDCEGYKPAPYFANRGMKWI QQVETSGQLDDDLKYYLSESYRIVASGLSKRKQRELGIEHLSEPRT
Sequences:
>Translated_126_residues MNYDEFNHFCGTFTGTSHVVQWGNSDVWKVGGKVFAIGGWSDGKKAAFTFKTSNLNYDFLSDCEGYKPAPYFANRGMKWI QQVETSGQLDDDLKYYLSESYRIVASGLSKRKQRELGIEHLSEPRT >Mature_126_residues MNYDEFNHFCGTFTGTSHVVQWGNSDVWKVGGKVFAIGGWSDGKKAAFTFKTSNLNYDFLSDCEGYKPAPYFANRGMKWI QQVETSGQLDDDLKYYLSESYRIVASGLSKRKQRELGIEHLSEPRT
Specific function: Unknown
COG id: COG2315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14352; Mature: 14352
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYDEFNHFCGTFTGTSHVVQWGNSDVWKVGGKVFAIGGWSDGKKAAFTFKTSNLNYDFL CCCCHHHHHHCCCCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEEECCCCCHHH SDCEGYKPAPYFANRGMKWIQQVETSGQLDDDLKYYLSESYRIVASGLSKRKQRELGIEH CCCCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHH LSEPRT HCCCCC >Mature Secondary Structure MNYDEFNHFCGTFTGTSHVVQWGNSDVWKVGGKVFAIGGWSDGKKAAFTFKTSNLNYDFL CCCCHHHHHHCCCCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEEECCCCCHHH SDCEGYKPAPYFANRGMKWIQQVETSGQLDDDLKYYLSESYRIVASGLSKRKQRELGIEH CCCCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCHHH LSEPRT HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA