Click here to switch to the map view.

The map label for this gene is spo0M [H]

Identifier: 218709214

GI number: 218709214

Start: 1297789

End: 1298532

Strand: Direct

Name: spo0M [H]

Synonym: VS_1221

Alternate gene names: 218709214

Gene position: 1297789-1298532 (Clockwise)

Preceding gene: 218709206

Following gene: 218709215

Centisome position: 39.34

GC content: 45.97

Gene sequence:

>744_bases
ATGTTTAAGAAATTAAAGGCCTCGTTGGGCATCGGTGCAGCAAAGGTTGATACCGTCTTAGATAATATTGAAGTTTTCCA
AGGTGGAGAGTTGTCTGGCAATGTTCACATTATTGGTGGCGACGTTGAGCAACAAATCGACCTGATTGACTTGGTTCTCA
ACACAGAAGTAAAAGTAGAAACGGAAGACAGCACAAGCTACGAAACCTTTTCACTGGGTCGTATTCAAGCCGTAGAGCCT
TTCGTTATCCAACCGGGTGAAACCAAACTGGTTCCATTCCGTCTTAAGTTAAATGATGAAACGCCAGTCACCGCGTTGAA
CGCGCAAATGAATCAGTGTCACGTGTGGGTAGAAACCAACCTAGATATCGGTTTCGCGATTGACCCTAAAGACCGCGACT
TCATCTCTGTACACCCATTGCCAACAGTCGCTAAAATCATCCAAGGTGTGGAAGCATCGGGAATGGCAATGGTGAAAGCT
GATGTAGAGAAGGGCTTCTTGAAAGGCAACAGCTTTGCTTCTCGCTCTGGCTGTTACCAAGAGATTGAATTTCGTAGCGG
CGGTTTCATGAATAATAAAGAGATCGAGCTGTCATTCATCGTTGAAGGCTCAATGGTTCATTGCTTAGCAGAAATCGACC
GTTCAATGAGCTTCCGTGGCGACCAATACATCTCATTCAGCTTGCCTGCAAACGCGGCCGACTCAGATATCCGCAACGCA
GTTTCAAGAATCATGAGTGCGTAG

Upstream 100 bases:

>100_bases
TCAACATAGATGGGGCAAATTGCTTGATTCTGTGAGGCAAGTGTCGCAAATTGTCACGCAATAACTATTCGTAAATCAGA
TAATTAGAAAGGGAAATAAT

Downstream 100 bases:

>100_bases
TTAACTCTCTGTTAGTAGTCGCTCTGTCGATTAATAGAGATAAGACAATACAACTTCTAAAGCCGAGCTTAACCGTTCGG
CTTTTTTGTTTGTAAATAAA

Product: putative sporulation-control protein

Products: NA

Alternate protein names: Stage 0 sporulation protein M [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFKKLKASLGIGAAKVDTVLDNIEVFQGGELSGNVHIIGGDVEQQIDLIDLVLNTEVKVETEDSTSYETFSLGRIQAVEP
FVIQPGETKLVPFRLKLNDETPVTALNAQMNQCHVWVETNLDIGFAIDPKDRDFISVHPLPTVAKIIQGVEASGMAMVKA
DVEKGFLKGNSFASRSGCYQEIEFRSGGFMNNKEIELSFIVEGSMVHCLAEIDRSMSFRGDQYISFSLPANAADSDIRNA
VSRIMSA

Sequences:

>Translated_247_residues
MFKKLKASLGIGAAKVDTVLDNIEVFQGGELSGNVHIIGGDVEQQIDLIDLVLNTEVKVETEDSTSYETFSLGRIQAVEP
FVIQPGETKLVPFRLKLNDETPVTALNAQMNQCHVWVETNLDIGFAIDPKDRDFISVHPLPTVAKIIQGVEASGMAMVKA
DVEKGFLKGNSFASRSGCYQEIEFRSGGFMNNKEIELSFIVEGSMVHCLAEIDRSMSFRGDQYISFSLPANAADSDIRNA
VSRIMSA
>Mature_247_residues
MFKKLKASLGIGAAKVDTVLDNIEVFQGGELSGNVHIIGGDVEQQIDLIDLVLNTEVKVETEDSTSYETFSLGRIQAVEP
FVIQPGETKLVPFRLKLNDETPVTALNAQMNQCHVWVETNLDIGFAIDPKDRDFISVHPLPTVAKIIQGVEASGMAMVKA
DVEKGFLKGNSFASRSGCYQEIEFRSGGFMNNKEIELSFIVEGSMVHCLAEIDRSMSFRGDQYISFSLPANAADSDIRNA
VSRIMSA

Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation [H]

COG id: COG4326

COG function: function code R; Sporulation control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spo0M family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014756
- InterPro:   IPR009776 [H]

Pfam domain/function: PF07070 Spo0M [H]

EC number: NA

Molecular weight: Translated: 27053; Mature: 27053

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLKASLGIGAAKVDTVLDNIEVFQGGELSGNVHIIGGDVEQQIDLIDLVLNTEVKVE
CCCHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCHHHHHEEEEEEECCEEEEE
TEDSTSYETFSLGRIQAVEPFVIQPGETKLVPFRLKLNDETPVTALNAQMNQCHVWVETN
ECCCCCEEEEECCEEEECCCEEECCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEEC
LDIGFAIDPKDRDFISVHPLPTVAKIIQGVEASGMAMVKADVEKGFLKGNSFASRSGCYQ
CEEEEEECCCCCCEEEECCCHHHHHHHCCCCCCCEEEEEECHHHCEECCCCCCCCCCCCE
EIEFRSGGFMNNKEIELSFIVEGSMVHCLAEIDRSMSFRGDQYISFSLPANAADSDIRNA
EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
VSRIMSA
HHHHHCC
>Mature Secondary Structure
MFKKLKASLGIGAAKVDTVLDNIEVFQGGELSGNVHIIGGDVEQQIDLIDLVLNTEVKVE
CCCHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCEEEEECCHHHHHEEEEEEECCEEEEE
TEDSTSYETFSLGRIQAVEPFVIQPGETKLVPFRLKLNDETPVTALNAQMNQCHVWVETN
ECCCCCEEEEECCEEEECCCEEECCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEEC
LDIGFAIDPKDRDFISVHPLPTVAKIIQGVEASGMAMVKADVEKGFLKGNSFASRSGCYQ
CEEEEEECCCCCCEEEECCCHHHHHHHCCCCCCCEEEEEECHHHCEECCCCCCCCCCCCE
EIEFRSGGFMNNKEIELSFIVEGSMVHCLAEIDRSMSFRGDQYISFSLPANAADSDIRNA
EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
VSRIMSA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9795118; 9202460; 9384377 [H]