| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709167
Identifier: 218709167
GI number: 218709167
Start: 1242951
End: 1243307
Strand: Direct
Name: 218709167
Synonym: VS_1174
Alternate gene names: NA
Gene position: 1242951-1243307 (Clockwise)
Preceding gene: 218709166
Following gene: 218709170
Centisome position: 37.67
GC content: 45.1
Gene sequence:
>357_bases ATGAGTGAAGAGTCATTCACCCAGAAACGTGAGTATTACCGCCTGAAGTACCCTAAAAAGGCGCGCCCAGTGATACGAAT CAAAGATGAACTTTTTCATGTCAGTGAAGTTTCTGAAAAAGGCGTGCGCTTGATGATGAGTAACATCATCCCGGTCTATC GAGGCTTCTCAATGGCAGGCACTTTATGGTTGCATGGTAATAACAGCATTGATATTCGTGGTTCTGTATTGAGGCAAGAA GGCGATGAAGTGATCGTTCTGTTATCACAAGGCCCGAGTTTCAAAGATATGGTGGCTGAACAACGACACATTAGGCAAAG GTACCCGGTTTTCTTCGCGAACCTCAGAGTGGCATAA
Upstream 100 bases:
>100_bases GTATGTTTCGAGCTTAGATTTGAAACAGAAAACAACGGATAGTTAGCTTGTTCATTTTTGCCAAGAAACAGAAACATGAA ACAAAGATAGGGAGTCATCG
Downstream 100 bases:
>100_bases GCAAAGCGTTCTAAACGCCTAAAACCCAAGTAACTCATCGTTATCTGATATAAAAAGCCCAGCACTTTGACGAGTGCTGG GCTTTGTTATCTATATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSEESFTQKREYYRLKYPKKARPVIRIKDELFHVSEVSEKGVRLMMSNIIPVYRGFSMAGTLWLHGNNSIDIRGSVLRQE GDEVIVLLSQGPSFKDMVAEQRHIRQRYPVFFANLRVA
Sequences:
>Translated_118_residues MSEESFTQKREYYRLKYPKKARPVIRIKDELFHVSEVSEKGVRLMMSNIIPVYRGFSMAGTLWLHGNNSIDIRGSVLRQE GDEVIVLLSQGPSFKDMVAEQRHIRQRYPVFFANLRVA >Mature_117_residues SEESFTQKREYYRLKYPKKARPVIRIKDELFHVSEVSEKGVRLMMSNIIPVYRGFSMAGTLWLHGNNSIDIRGSVLRQEG DEVIVLLSQGPSFKDMVAEQRHIRQRYPVFFANLRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13789; Mature: 13658
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEESFTQKREYYRLKYPKKARPVIRIKDELFHVSEVSEKGVRLMMSNIIPVYRGFSMAG CCCCHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLWLHGNNSIDIRGSVLRQEGDEVIVLLSQGPSFKDMVAEQRHIRQRYPVFFANLRVA EEEEECCCEEEEEHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure SEESFTQKREYYRLKYPKKARPVIRIKDELFHVSEVSEKGVRLMMSNIIPVYRGFSMAG CCCHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLWLHGNNSIDIRGSVLRQEGDEVIVLLSQGPSFKDMVAEQRHIRQRYPVFFANLRVA EEEEECCCEEEEEHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA