| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is hisC1 [H]
Identifier: 218709145
GI number: 218709145
Start: 1219515
End: 1220648
Strand: Direct
Name: hisC1 [H]
Synonym: VS_1152
Alternate gene names: 218709145
Gene position: 1219515-1220648 (Clockwise)
Preceding gene: 218709138
Following gene: 218709146
Centisome position: 36.96
GC content: 43.92
Gene sequence:
>1134_bases TTGACATCTTTTATTGATAGCTTAGTGCCTCAGGCTGTAAAAAAATTAATACCTTATCAATCGGCAAGAAGAATTGGTGG TGATGGACGTGTCTGGCTAAACGCTAATGAATTGGAAAGCCCGCTGTTTCAAGGAGAAGCAAGTCACAACCGATACCCGG ACTTCTTACCACAAGATATTGCTAAGGCTTACCAAGATTACTGTGGCACTGATGCCGCGACGGTTGCTGTCCGTGGTGCA GATGAAGCGATTGATTTGCTGATCAGAACATTCTGTAAACCGGCGAGCGATAACATACTTATCTGTTCTCCAACGTATGC GATGTATGAGTTTTGCGCCGATGCATTGGCGATTAATACCTTAGACTCTCCATTGCAGGAAGACTTCAGCCTTAATGTTG CTGATATCGTGAATAAAGCGGAATTGGCTAATATCGTGTTTCTTTGCTCACCAAACAACCCTACGGGCAATGTGATCCCT AAATTGGATTTGATTCAGGTACTGGAAGGCACGATTGGCAAGTCGCTAGTGGTAGTCGATGAAGCGTATATCGAATTTGA ACCACAAACGTCAGCGGTGAGCCTTATTGCGCGTTATCCGCATTTGGTTGTGATTCGCACCTTGTCTAAGGCGTTTGGGT TGGCTGCGGTTCGTTGTGGCTTTATCTTAGCGAGTCAAAATGTGATGCAGTATGTCGCGAAGTTGATTCCACCTTATCCG ATGCCAGATTGCTCATCTCAAATTGTACTAGACGCATTGTCTGATGAACGAATTGCGTTGATGGAAAGCGCGACGTTAAA GTTGGTCGAATTGCGTAATCGGTTTGCTTGTGAGCTAACGCGGTTTGAATTTATAGAACAGGTTTATCCGTCATCGACCA ATTTCGTTTTGCTACGTCAAAAACCGGGGCACCATGTGTTTAGCGTATTGGCGAAGGATGGCATTGTTACAAGAAACCAA AACCACGAACCTGCTTTGCGTAACTGTGTACGAATCAGTATTGGTAGCCAAGAGAGCATGCTAGAAGTGATAACGTCACT AACACGCTACCAAACCGAATTAGAAAAGAATCAACAAGGCAAACAATCTCAGCATAAAGAAACTCAATCTCAACTCGATA AAGATCATATCTAG
Upstream 100 bases:
>100_bases TACTTAATCATCATTTGTGATTCAATATGTGTATAAGTCACATTTTTTGAATATGAAGGCAATGATGAAGACATTGTGAT TTTTTGAAAGGGATAGCTTC
Downstream 100 bases:
>100_bases GATGGCAATGATGAAAAAGATAATACTAGGACTCGCTTGTGCGGCCGCTTTACTTGGTACAACGGTACAGGCGAAAGAAA TCCGTTTGGCGTCAGACTTT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTSFIDSLVPQAVKKLIPYQSARRIGGDGRVWLNANELESPLFQGEASHNRYPDFLPQDIAKAYQDYCGTDAATVAVRGA DEAIDLLIRTFCKPASDNILICSPTYAMYEFCADALAINTLDSPLQEDFSLNVADIVNKAELANIVFLCSPNNPTGNVIP KLDLIQVLEGTIGKSLVVVDEAYIEFEPQTSAVSLIARYPHLVVIRTLSKAFGLAAVRCGFILASQNVMQYVAKLIPPYP MPDCSSQIVLDALSDERIALMESATLKLVELRNRFACELTRFEFIEQVYPSSTNFVLLRQKPGHHVFSVLAKDGIVTRNQ NHEPALRNCVRISIGSQESMLEVITSLTRYQTELEKNQQGKQSQHKETQSQLDKDHI
Sequences:
>Translated_377_residues MTSFIDSLVPQAVKKLIPYQSARRIGGDGRVWLNANELESPLFQGEASHNRYPDFLPQDIAKAYQDYCGTDAATVAVRGA DEAIDLLIRTFCKPASDNILICSPTYAMYEFCADALAINTLDSPLQEDFSLNVADIVNKAELANIVFLCSPNNPTGNVIP KLDLIQVLEGTIGKSLVVVDEAYIEFEPQTSAVSLIARYPHLVVIRTLSKAFGLAAVRCGFILASQNVMQYVAKLIPPYP MPDCSSQIVLDALSDERIALMESATLKLVELRNRFACELTRFEFIEQVYPSSTNFVLLRQKPGHHVFSVLAKDGIVTRNQ NHEPALRNCVRISIGSQESMLEVITSLTRYQTELEKNQQGKQSQHKETQSQLDKDHI >Mature_376_residues TSFIDSLVPQAVKKLIPYQSARRIGGDGRVWLNANELESPLFQGEASHNRYPDFLPQDIAKAYQDYCGTDAATVAVRGAD EAIDLLIRTFCKPASDNILICSPTYAMYEFCADALAINTLDSPLQEDFSLNVADIVNKAELANIVFLCSPNNPTGNVIPK LDLIQVLEGTIGKSLVVVDEAYIEFEPQTSAVSLIARYPHLVVIRTLSKAFGLAAVRCGFILASQNVMQYVAKLIPPYPM PDCSSQIVLDALSDERIALMESATLKLVELRNRFACELTRFEFIEQVYPSSTNFVLLRQKPGHHVFSVLAKDGIVTRNQN HEPALRNCVRISIGSQESMLEVITSLTRYQTELEKNQQGKQSQHKETQSQLDKDHI
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=349, Percent_Identity=42.9799426934097, Blast_Score=293, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6322075, Length=371, Percent_Identity=30.188679245283, Blast_Score=159, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41926; Mature: 41795
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFIDSLVPQAVKKLIPYQSARRIGGDGRVWLNANELESPLFQGEASHNRYPDFLPQDI CCHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECHHHHCHHHCCCCCCCCCCCCCHHHH AKAYQDYCGTDAATVAVRGADEAIDLLIRTFCKPASDNILICSPTYAMYEFCADALAINT HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH LDSPLQEDFSLNVADIVNKAELANIVFLCSPNNPTGNVIPKLDLIQVLEGTIGKSLVVVD CCCHHHHHCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE EAYIEFEPQTSAVSLIARYPHLVVIRTLSKAFGLAAVRCGFILASQNVMQYVAKLIPPYP EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MPDCSSQIVLDALSDERIALMESATLKLVELRNRFACELTRFEFIEQVYPSSTNFVLLRQ CCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC KPGHHVFSVLAKDGIVTRNQNHEPALRNCVRISIGSQESMLEVITSLTRYQTELEKNQQG CCCHHHHHHHHHCCCEECCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC KQSQHKETQSQLDKDHI HHHHHHHHHHHHHCCCC >Mature Secondary Structure TSFIDSLVPQAVKKLIPYQSARRIGGDGRVWLNANELESPLFQGEASHNRYPDFLPQDI CHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECHHHHCHHHCCCCCCCCCCCCCHHHH AKAYQDYCGTDAATVAVRGADEAIDLLIRTFCKPASDNILICSPTYAMYEFCADALAINT HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH LDSPLQEDFSLNVADIVNKAELANIVFLCSPNNPTGNVIPKLDLIQVLEGTIGKSLVVVD CCCHHHHHCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE EAYIEFEPQTSAVSLIARYPHLVVIRTLSKAFGLAAVRCGFILASQNVMQYVAKLIPPYP EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MPDCSSQIVLDALSDERIALMESATLKLVELRNRFACELTRFEFIEQVYPSSTNFVLLRQ CCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC KPGHHVFSVLAKDGIVTRNQNHEPALRNCVRISIGSQESMLEVITSLTRYQTELEKNQQG CCCHHHHHHHHHCCCEECCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC KQSQHKETQSQLDKDHI HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]