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The map label for this gene is tolR [H]

Identifier: 218709108

GI number: 218709108

Start: 1178444

End: 1178887

Strand: Direct

Name: tolR [H]

Synonym: VS_1114

Alternate gene names: 218709108

Gene position: 1178444-1178887 (Clockwise)

Preceding gene: 218709107

Following gene: 218709109

Centisome position: 35.72

GC content: 45.05

Gene sequence:

>444_bases
ATGGCCGGATACCAACCTAAAAAACGCAAAATGACAGCAGAGATTAACGTTGTACCTTACATCGACGTTATGCTTGTTTT
GCTGATCATTTTTATGGTGACTTCGCCATTTGTTACTCAAGGCGTAGATGTTGAATTGCCTCAAGCTTCAACGGCCAAAT
CTGCACAAGATCTATTGGGTGACGACAACGCGAGTTTCATTATCGTTGAAGTGAACAAAGATGGTGAGCTTGGTTTGAGT
GTTAATAACGAAGAGGTTCAGCGAGGCTTGTCTCTGGAAGATATTATCGTCCGAGTGAAGGCGGAACTGTCTCTGAACCC
AAATTCTCCAGTGGCGGTTGGCGGTGATGCTGCAACGCCTTACGCTGAAGTGGTTATCTTACTTGATGAATTAAGCCGTG
CAGGTGTGCCAAAGGTTGGCCTTTTGACGGATATAAGGGAATAG

Upstream 100 bases:

>100_bases
TAGCAGCCGAGTTGGTAAGTTAGAGCACAACTACGCGACTTTCTCTGAAGAGTTCCATAGCATTCTTCACCGTCAAGCGA
TGGCTGGCAGGGAATAATAG

Downstream 100 bases:

>100_bases
CTCCGTAGCATTCATGAAAGCGAATAATAAAAAATCCAATAATTTTAGATCACCGCTTCTTATTTCTCTTGGGCTGCACG
TCGTTTTATTCGTTGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAGYQPKKRKMTAEINVVPYIDVMLVLLIIFMVTSPFVTQGVDVELPQASTAKSAQDLLGDDNASFIIVEVNKDGELGLS
VNNEEVQRGLSLEDIIVRVKAELSLNPNSPVAVGGDAATPYAEVVILLDELSRAGVPKVGLLTDIRE

Sequences:

>Translated_147_residues
MAGYQPKKRKMTAEINVVPYIDVMLVLLIIFMVTSPFVTQGVDVELPQASTAKSAQDLLGDDNASFIIVEVNKDGELGLS
VNNEEVQRGLSLEDIIVRVKAELSLNPNSPVAVGGDAATPYAEVVILLDELSRAGVPKVGLLTDIRE
>Mature_146_residues
AGYQPKKRKMTAEINVVPYIDVMLVLLIIFMVTSPFVTQGVDVELPQASTAKSAQDLLGDDNASFIIVEVNKDGELGLSV
NNEEVQRGLSLEDIIVRVKAELSLNPNSPVAVGGDAATPYAEVVILLDELSRAGVPKVGLLTDIRE

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1786959, Length=133, Percent_Identity=39.0977443609023, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15791; Mature: 15660

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYQPKKRKMTAEINVVPYIDVMLVLLIIFMVTSPFVTQGVDVELPQASTAKSAQDLLG
CCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCHHCCCCEECCCCCCHHHHHHHHC
DDNASFIIVEVNKDGELGLSVNNEEVQRGLSLEDIIVRVKAELSLNPNSPVAVGGDAATP
CCCCCEEEEEECCCCCEEEEECHHHHHHCCCHHHEEEEEEEEEEECCCCCEEECCCCCCC
YAEVVILLDELSRAGVPKVGLLTDIRE
HHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGYQPKKRKMTAEINVVPYIDVMLVLLIIFMVTSPFVTQGVDVELPQASTAKSAQDLLG
CCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCHHCCCCEECCCCCCHHHHHHHHC
DDNASFIIVEVNKDGELGLSVNNEEVQRGLSLEDIIVRVKAELSLNPNSPVAVGGDAATP
CCCCCEEEEEECCCCCEEEEECHHHHHHCCCHHHEEEEEEEEEEECCCCCEEECCCCCCC
YAEVVILLDELSRAGVPKVGLLTDIRE
HHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]