Click here to switch to the map view.

The map label for this gene is fliK [C]

Identifier: 218708828

GI number: 218708828

Start: 850074

End: 852191

Strand: Direct

Name: fliK [C]

Synonym: VS_0828

Alternate gene names: 218708828

Gene position: 850074-852191 (Clockwise)

Preceding gene: 218708827

Following gene: 218708829

Centisome position: 25.77

GC content: 48.02

Gene sequence:

>2118_bases
ATGAATGTTAGTCTTTCCTCAAATTCAGCGACCAACAAAACGTCATCGTTGTTGGACTCCGGTTCTGCCTCTTCAAAGGT
AGAAGAAACTGGAGACTCTAAAGGTTTCTTTGAGTCTTTCAAAGAAGCACTAGGCTTTGAAGAAAGTGACAGTAAAGTCG
CAGCAAAAGACACAGAAAGCACCGCGAAACCTGATGCTAAACAGGCCTCTACCGAAGGTGAAGCGTCAGCCGAAGCGAAC
AAAGGTGATTCAGCTGAATCAAAGGCTACTGACGAAGTAAGCGAAGCGCAAAGCAAGCAAGCAGCTTCAGAAGTAGAAGG
CGAGAAAGCTGCTGAGGAAACATCTGCAGAGGCTGTGTCTGGAACTGAGGCTAAGCTCAAAGCCAATTCGGGCACTGATA
GCACTGTCGCTGATAAAACTGTCGCAGATAAGGCGGATGGTAAAGATGCGCAGGTTACGAAGAATGATTCTAAAGAACAG
GTTGCTCAATCTCAAACTCAGGGTACATCAGCTGTAGATGGCTCTACGCAAGCATCGCAAGCTAATGCAGCGATGAATGA
AGGCAATAAATTGCTTGGTCAATTGGATGAGGCAAACAAAACTCTAAATCAAGCGCCAAACGGCAAAGGCTTGCCTCAGC
AAGGTCAGGTAGATAAAGCCCAAGGTAATATCCCCGGTGCTTCAGTTGCAGTCGCTTCCGTTACGGATGAGGCGACACAA
CAAACGAATGCAGCAATCCAAGAGAATAGTCTTGAGGTGGATTCTGAAATCGCTGTTCTTACCGGAGGTAAGGGTGTGTC
TCAGCTGACTGATGATGAAATCCGACAGTTGATGGATAAAGGCGTCACTCCAGAACAAATTGAAGCCAGTATGAACCGAG
AGCTGAGTCAAAAGAATGCGGCTAGCGCCGCGGTGGCCGAACAGAGCCAAGCGATCTCAGCTGCGGATATTGAACTAGCC
AAGCAGGTTGATGCCCATACCAAAGCACTAAAACAATTGAATGGACAAATCGAATCAGAACAGTCTGTTGTCGATAGCTT
GCTTAAGAAGCAACAAAGTGGTGCTAAGTTGACGGTTGATGAGCAAGCCGCTTTGGCTAAAGCGACCTCTAACTTAGACC
TGTTGAATCAACAGCTCACTAACGTTCAACAACAAGTAACGGCTTTGCTAAATCAAGCTCCGGCTGTGAACAGCGCGTCT
GGTGAACCCGCTGCTATTGATTGGGATAATACGGATTCAAGCGAAACTAAAGCTTTAGCTGCGGCGGCATCAATAGCAGC
TGTAGCGACGGCTGCACAACAAGTGTCAGCGCAGGCCGCTTCTCAATCAACAAACAATGCTCTTACGGATAAGGCAGCAA
TGCTGCACGCCAACAATGCACATGCAGCCGCTCAACAAGCTAATGTTGCTTCACCTCAGCAGCAAGCAACGTTGGATCCA
GCTTTAACCGCGCAAGGGATCGCGATGAATGCAGCACCAGTCACTACAAAAGCAGGCTCTACTGATGCGCTTCTTAAAGC
GGGCGCAGGTGCCGCTGCATTGTCTGGTTTGGGCAAAGCCGGTGCTAAAGAAGATTCTAAAGATTCGACCTTTGCTCAGC
AGATAGCCTCGGCGGCTGGCGCGCAAGGTACAGCTACGGTGGGTTCAGCACCTACGCGAGCTGAAATTCAAGCGGCTCAA
CAGGCACCTTTGCAACTCACTAAAGAGTTAGCGAACGAGCAGGTGGCGGAAAAAGTCCAAATGATGATGTCTAAGAATCT
CAAGAACTTAGATATCCGTCTTGACCCACCAGAGTTGGGGCAGATGAAAATTCGCATGACCATGAATAATGACGTGGCGA
ACGTGCACTTTACTGTCGGTAGCCAACAAGCGAGAGAGGTTATTGAACAAACCTTACCTCGCTTGAGGGAGATGCTCGCT
CAGCAAGGGATGCAGCTTGCTGAGTCTTCAGTTCAGCAGCAGAATACTGGTCAGGGGCAAGACAGGTACAATAATGGTGA
GCAACAATCAGGCTCTAACCGTATAAATGATGGTCAAGGTGATGAAAACCTTGATAGCAACAGCAATCTTGAATTGAATG
TCACGTCAAAGCGTGATGGAATTAGTTATTATGCCTAG

Upstream 100 bases:

>100_bases
TCAAATTGCGAGTTATGCTCACCAAAGGCATAAAAAGCACCCGACTTTCTTTTTGTTGTCTGATTCATGGCAGCAAAGCT
AGTAGATAGAGCTTGTATAT

Downstream 100 bases:

>100_bases
TATCAGGCTAAAACACTTAGCTAATAGAAAGAACCGTTAGTTTATAGAAGAACAGTTAGTTAATAGAAAGTACCGTTAGT
TAATAGAAGAACAGGAAGTT

Product: polar flagellar hook-length control protein FliK

Products: NA

Alternate protein names: Flagellar Hook-Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein FliK; Flagellar Hook-Length Control Protein-Like; Flagellar Hook Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MNVSLSSNSATNKTSSLLDSGSASSKVEETGDSKGFFESFKEALGFEESDSKVAAKDTESTAKPDAKQASTEGEASAEAN
KGDSAESKATDEVSEAQSKQAASEVEGEKAAEETSAEAVSGTEAKLKANSGTDSTVADKTVADKADGKDAQVTKNDSKEQ
VAQSQTQGTSAVDGSTQASQANAAMNEGNKLLGQLDEANKTLNQAPNGKGLPQQGQVDKAQGNIPGASVAVASVTDEATQ
QTNAAIQENSLEVDSEIAVLTGGKGVSQLTDDEIRQLMDKGVTPEQIEASMNRELSQKNAASAAVAEQSQAISAADIELA
KQVDAHTKALKQLNGQIESEQSVVDSLLKKQQSGAKLTVDEQAALAKATSNLDLLNQQLTNVQQQVTALLNQAPAVNSAS
GEPAAIDWDNTDSSETKALAAAASIAAVATAAQQVSAQAASQSTNNALTDKAAMLHANNAHAAAQQANVASPQQQATLDP
ALTAQGIAMNAAPVTTKAGSTDALLKAGAGAAALSGLGKAGAKEDSKDSTFAQQIASAAGAQGTATVGSAPTRAEIQAAQ
QAPLQLTKELANEQVAEKVQMMMSKNLKNLDIRLDPPELGQMKIRMTMNNDVANVHFTVGSQQAREVIEQTLPRLREMLA
QQGMQLAESSVQQQNTGQGQDRYNNGEQQSGSNRINDGQGDENLDSNSNLELNVTSKRDGISYYA

Sequences:

>Translated_705_residues
MNVSLSSNSATNKTSSLLDSGSASSKVEETGDSKGFFESFKEALGFEESDSKVAAKDTESTAKPDAKQASTEGEASAEAN
KGDSAESKATDEVSEAQSKQAASEVEGEKAAEETSAEAVSGTEAKLKANSGTDSTVADKTVADKADGKDAQVTKNDSKEQ
VAQSQTQGTSAVDGSTQASQANAAMNEGNKLLGQLDEANKTLNQAPNGKGLPQQGQVDKAQGNIPGASVAVASVTDEATQ
QTNAAIQENSLEVDSEIAVLTGGKGVSQLTDDEIRQLMDKGVTPEQIEASMNRELSQKNAASAAVAEQSQAISAADIELA
KQVDAHTKALKQLNGQIESEQSVVDSLLKKQQSGAKLTVDEQAALAKATSNLDLLNQQLTNVQQQVTALLNQAPAVNSAS
GEPAAIDWDNTDSSETKALAAAASIAAVATAAQQVSAQAASQSTNNALTDKAAMLHANNAHAAAQQANVASPQQQATLDP
ALTAQGIAMNAAPVTTKAGSTDALLKAGAGAAALSGLGKAGAKEDSKDSTFAQQIASAAGAQGTATVGSAPTRAEIQAAQ
QAPLQLTKELANEQVAEKVQMMMSKNLKNLDIRLDPPELGQMKIRMTMNNDVANVHFTVGSQQAREVIEQTLPRLREMLA
QQGMQLAESSVQQQNTGQGQDRYNNGEQQSGSNRINDGQGDENLDSNSNLELNVTSKRDGISYYA
>Mature_705_residues
MNVSLSSNSATNKTSSLLDSGSASSKVEETGDSKGFFESFKEALGFEESDSKVAAKDTESTAKPDAKQASTEGEASAEAN
KGDSAESKATDEVSEAQSKQAASEVEGEKAAEETSAEAVSGTEAKLKANSGTDSTVADKTVADKADGKDAQVTKNDSKEQ
VAQSQTQGTSAVDGSTQASQANAAMNEGNKLLGQLDEANKTLNQAPNGKGLPQQGQVDKAQGNIPGASVAVASVTDEATQ
QTNAAIQENSLEVDSEIAVLTGGKGVSQLTDDEIRQLMDKGVTPEQIEASMNRELSQKNAASAAVAEQSQAISAADIELA
KQVDAHTKALKQLNGQIESEQSVVDSLLKKQQSGAKLTVDEQAALAKATSNLDLLNQQLTNVQQQVTALLNQAPAVNSAS
GEPAAIDWDNTDSSETKALAAAASIAAVATAAQQVSAQAASQSTNNALTDKAAMLHANNAHAAAQQANVASPQQQATLDP
ALTAQGIAMNAAPVTTKAGSTDALLKAGAGAAALSGLGKAGAKEDSKDSTFAQQIASAAGAQGTATVGSAPTRAEIQAAQ
QAPLQLTKELANEQVAEKVQMMMSKNLKNLDIRLDPPELGQMKIRMTMNNDVANVHFTVGSQQAREVIEQTLPRLREMLA
QQGMQLAESSVQQQNTGQGQDRYNNGEQQSGSNRINDGQGDENLDSNSNLELNVTSKRDGISYYA

Specific function: Controls The Length Of The Flagellar Hook. [C]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72846; Mature: 72846

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSLSSNSATNKTSSLLDSGSASSKVEETGDSKGFFESFKEALGFEESDSKVAAKDTES
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCC
TAKPDAKQASTEGEASAEANKGDSAESKATDEVSEAQSKQAASEVEGEKAAEETSAEAVS
CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTEAKLKANSGTDSTVADKTVADKADGKDAQVTKNDSKEQVAQSQTQGTSAVDGSTQASQ
CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH
ANAAMNEGNKLLGQLDEANKTLNQAPNGKGLPQQGQVDKAQGNIPGASVAVASVTDEATQ
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
QTNAAIQENSLEVDSEIAVLTGGKGVSQLTDDEIRQLMDKGVTPEQIEASMNRELSQKNA
HHHHHHHHCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ASAAVAEQSQAISAADIELAKQVDAHTKALKQLNGQIESEQSVVDSLLKKQQSGAKLTVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEC
EQAALAKATSNLDLLNQQLTNVQQQVTALLNQAPAVNSASGEPAAIDWDNTDSSETKALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHH
AAASIAAVATAAQQVSAQAASQSTNNALTDKAAMLHANNAHAAAQQANVASPQQQATLDP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHCCCCCCHHHHCCCH
ALTAQGIAMNAAPVTTKAGSTDALLKAGAGAAALSGLGKAGAKEDSKDSTFAQQIASAAG
HHHHCCCEECCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
AQGTATVGSAPTRAEIQAAQQAPLQLTKELANEQVAEKVQMMMSKNLKNLDIRLDPPELG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
QMKIRMTMNNDVANVHFTVGSQQAREVIEQTLPRLREMLAQQGMQLAESSVQQQNTGQGQ
CEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRYNNGEQQSGSNRINDGQGDENLDSNSNLELNVTSKRDGISYYA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNVSLSSNSATNKTSSLLDSGSASSKVEETGDSKGFFESFKEALGFEESDSKVAAKDTES
CCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCC
TAKPDAKQASTEGEASAEANKGDSAESKATDEVSEAQSKQAASEVEGEKAAEETSAEAVS
CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTEAKLKANSGTDSTVADKTVADKADGKDAQVTKNDSKEQVAQSQTQGTSAVDGSTQASQ
CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH
ANAAMNEGNKLLGQLDEANKTLNQAPNGKGLPQQGQVDKAQGNIPGASVAVASVTDEATQ
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
QTNAAIQENSLEVDSEIAVLTGGKGVSQLTDDEIRQLMDKGVTPEQIEASMNRELSQKNA
HHHHHHHHCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ASAAVAEQSQAISAADIELAKQVDAHTKALKQLNGQIESEQSVVDSLLKKQQSGAKLTVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEC
EQAALAKATSNLDLLNQQLTNVQQQVTALLNQAPAVNSASGEPAAIDWDNTDSSETKALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHH
AAASIAAVATAAQQVSAQAASQSTNNALTDKAAMLHANNAHAAAQQANVASPQQQATLDP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHCCCCCCHHHHCCCH
ALTAQGIAMNAAPVTTKAGSTDALLKAGAGAAALSGLGKAGAKEDSKDSTFAQQIASAAG
HHHHCCCEECCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
AQGTATVGSAPTRAEIQAAQQAPLQLTKELANEQVAEKVQMMMSKNLKNLDIRLDPPELG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
QMKIRMTMNNDVANVHFTVGSQQAREVIEQTLPRLREMLAQQGMQLAESSVQQQNTGQGQ
CEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRYNNGEQQSGSNRINDGQGDENLDSNSNLELNVTSKRDGISYYA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA