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The map label for this gene is flaA [H]

Identifier: 218708812

GI number: 218708812

Start: 831571

End: 832770

Strand: Direct

Name: flaA [H]

Synonym: VS_0812

Alternate gene names: 218708812

Gene position: 831571-832770 (Clockwise)

Preceding gene: 218708811

Following gene: 218708813

Centisome position: 25.2

GC content: 44.42

Gene sequence:

>1200_bases
ATGGCTATTAATGTAAGCACTAACGTATCTGCTATGACAGCACAACGATACTTGAATAAATCGTCTAATGAACTAGCGAC
CTCTATGGAACGTTTGTCATCAGGCCACAAGATCAACAGTGCAAAAGATGATGCAGCTGGTCTACAAATATCAAACCGTT
TAACAGCCCAGTCTCGTGGTCTTGATGTAGCGATGCGTAATGCAAATGATGGTATTTCGATTGCTCAAACTGCAGAAGGC
GCGATGAACGAATCAACGAACATACTACAACGTATGCGTGATCTAGCGATTCAGTCATCAAACGGCACTAACTCTCCAGC
AGAGCGTCAAGCACTAAACGAAGAGACTATGGCTCTTCAAGATGAGCTTAACCGTATCGCAGAGACCACGGCTTTCGGTG
GCCGCCGTTTGTTGAATGGCTCATTTGGTGAAGCTTCATTCCAGATTGGTTCAAATTCTGGTGAAGCGATGATCATGGCG
CTGACGAGTATCCGAGCGGATGATTTCCGTATGGGTGGAACGACATTCGACACTGAAAACGCTAAAGATAAAAGCTGGGA
AGTACCACTAGAAGCCAAAGATCTTAAGTTTGAATTCAAAACCAAAGCGGGTGAAGAGGTTGCTATAGATATAAGCGCTA
AAGCAGGCGACGATATCGAAGAACTAGCCACCTACATAAATGGTCAATCTGATTTGATTAATGCGTCGGTTACCGATGAA
GGACGCCTGCAGGTATTTGTTGCTGAGCCAGATTTAGATGGTGAGATGAGAATCTCGGGTGGTTTAGCTTCCGAACTTGG
TTTCAAAAATGATGCTCCTGAAGGCCAGGAAACCACAACTACGGCGGATGGCAAAGTTGTACCTGCTCCTGCTGTAGGTC
GAACGACATTAGTTCAAGATATCGATTTGAATACTGTAGCAGGTTCACAAAACGCAATCAGTGTCATCGACTCTGCAATG
CAGTACGTTGATTCACAGCGTGCTGATTTGGGTGCGAAACAAAACCGTCTAAGCCACAGTATTAATAACTTGGCAAACGT
TCAAGAGAACGTAGACGCTTCAAACAGCCGAATCAAAGATACGGACTTTGCGAAAGAGACAACGCAAATGACCAAAGCTC
AAATCCTGCAACAAGCTGGTACATCAATACTTGCTCAAGCAAAACAGTTGCCTAACTCTGCAATATCACTATTGCAATAG

Upstream 100 bases:

>100_bases
TTATCTAGGGTTTATCGCGTAATACACGGTCAGTGCTTATCCATATGAGAGTAAAGCTGGCCGCTTCGCAGAAATTTTGC
GAACTCATAAGGAGAGCAAT

Downstream 100 bases:

>100_bases
TTATTGGTTGAACTCGCTATTCGTGTTCAGACGTGAACCGCTTAGCGAGGGATACTGGCAAGCATACTTACTATTGGGTG
TTTAGCTCTCTCATCTCTCA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAINVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEG
AMNESTNILQRMRDLAIQSSNGTNSPAERQALNEETMALQDELNRIAETTAFGGRRLLNGSFGEASFQIGSNSGEAMIMA
LTSIRADDFRMGGTTFDTENAKDKSWEVPLEAKDLKFEFKTKAGEEVAIDISAKAGDDIEELATYINGQSDLINASVTDE
GRLQVFVAEPDLDGEMRISGGLASELGFKNDAPEGQETTTTADGKVVPAPAVGRTTLVQDIDLNTVAGSQNAISVIDSAM
QYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAISLLQ

Sequences:

>Translated_399_residues
MAINVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEG
AMNESTNILQRMRDLAIQSSNGTNSPAERQALNEETMALQDELNRIAETTAFGGRRLLNGSFGEASFQIGSNSGEAMIMA
LTSIRADDFRMGGTTFDTENAKDKSWEVPLEAKDLKFEFKTKAGEEVAIDISAKAGDDIEELATYINGQSDLINASVTDE
GRLQVFVAEPDLDGEMRISGGLASELGFKNDAPEGQETTTTADGKVVPAPAVGRTTLVQDIDLNTVAGSQNAISVIDSAM
QYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAISLLQ
>Mature_398_residues
AINVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEGA
MNESTNILQRMRDLAIQSSNGTNSPAERQALNEETMALQDELNRIAETTAFGGRRLLNGSFGEASFQIGSNSGEAMIMAL
TSIRADDFRMGGTTFDTENAKDKSWEVPLEAKDLKFEFKTKAGEEVAIDISAKAGDDIEELATYINGQSDLINASVTDEG
RLQVFVAEPDLDGEMRISGGLASELGFKNDAPEGQETTTTADGKVVPAPAVGRTTLVQDIDLNTVAGSQNAISVIDSAMQ
YVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAISLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is essential for flagellar synthesis and full motility. Important for virulence at two different levels:is needed for crossing the fish integument and may

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=194, Percent_Identity=41.2371134020619, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 42634; Mature: 42502

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRG
CEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCC
LDVAMRNANDGISIAQTAEGAMNESTNILQRMRDLAIQSSNGTNSPAERQALNEETMALQ
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTAFGGRRLLNGSFGEASFQIGSNSGEAMIMALTSIRADDFRMGGTTFDTEN
HHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCCEECCCC
AKDKSWEVPLEAKDLKFEFKTKAGEEVAIDISAKAGDDIEELATYINGQSDLINASVTDE
CCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCC
GRLQVFVAEPDLDGEMRISGGLASELGFKNDAPEGQETTTTADGKVVPAPAVGRTTLVQD
CCEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCEECCCCEEECCCCCCCCCEEEE
IDLNTVAGSQNAISVIDSAMQYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKD
CCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAISLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
AINVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRG
EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCC
LDVAMRNANDGISIAQTAEGAMNESTNILQRMRDLAIQSSNGTNSPAERQALNEETMALQ
CEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHH
DELNRIAETTAFGGRRLLNGSFGEASFQIGSNSGEAMIMALTSIRADDFRMGGTTFDTEN
HHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCEECCCCEECCCC
AKDKSWEVPLEAKDLKFEFKTKAGEEVAIDISAKAGDDIEELATYINGQSDLINASVTDE
CCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCC
GRLQVFVAEPDLDGEMRISGGLASELGFKNDAPEGQETTTTADGKVVPAPAVGRTTLVQD
CCEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCEECCCCEEECCCCCCCCCEEEE
IDLNTVAGSQNAISVIDSAMQYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKD
CCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAISLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8631707 [H]