Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is hemK [H]
Identifier: 218708756
GI number: 218708756
Start: 774218
End: 775090
Strand: Direct
Name: hemK [H]
Synonym: VS_0753
Alternate gene names: 218708756
Gene position: 774218-775090 (Clockwise)
Preceding gene: 218708755
Following gene: 218708757
Centisome position: 23.47
GC content: 45.13
Gene sequence:
>873_bases ATGCAGTCAGCATATACGGTTGAAAGTGCTTTAAAGTCAGCAATCGTACAGCTTCAAGAGGGCGATAACACATCGCCCTC GATTGATGCTACGGTACTGCTTTGCCACGCCTTAGATAAACCTAGATCTTACCTACTGACTTGGCCTGAGAAGCATCTCA CTTCAGAACAAGAATCCGAATTCAATACCCTTCTAAAACGTCGCTTAACCGGTGAGCCTGTGGCTTATATTGTTGGTGAA CGTGAGTTTTGGTCGCTGCCGTTAAAAGTTTCTCCTTCTACTTTAATCCCACGTCCAGATACGGAACGCTTGGTTGAAGT GGCGTTAGACAAAACGTATGGCAAGCAAGGTGCGATTCTCGATTTAGGAACTGGTACTGGTGCGATCGCTTTGGCATTGG CGTCTGAGATGCCGAACCGACCAGTGACGGGTATTGATCTTCGTCCGGAAGCGCAGCAACTTGCGACAGAAAACGCTCAG CGATTAAATATCACTAACGCCACTTTTTTACATGGCAGTTGGTTTGAACCTTTGAACTCGGTGAATTCTGAAGAAAAAGC TGTGAAGTTCTCGTTGATTGTCTCTAACCCACCTTACATTGAGAAGAATGACCCTCATTTATCTCAAGGTGATGTGCGTT TTGAACCGATCACAGCGTTAGTTGCTGAAGAGAAAGGTTTAGCTGATATTCGATACATCTCTGAAAATGCACGAAGCTTT TTAGAAAACGAAGGTTGGTTAGCGTTTGAACACGGTTACGACCAAGGTTTAGCTGTACGTGAGATTATGCAGGCGCTCGG ATATCTCGATGTTGTGACAGAGAAAGATTACGGTGGTAATGACCGAGTGACATTGGGTCGTTACTGTTCATAG
Upstream 100 bases:
>100_bases ACGAAGTTCTGGAAGGTGATATGCAAAGCCTGCTTGATCCTGTTCTACAAGAGCACCAAGCCGATCAACTAGCAGCACTT GCTGAGCACAACTAATTACT
Downstream 100 bases:
>100_bases GCTGCTGTTAATCATCTTGTGAGCAATAGATGATGAACTTGCTAAATTGATACCTTTAACTCGAAAATACACTTAACTTG ATAATGCATTTAACGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: M.VchAHemK2P [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQSAYTVESALKSAIVQLQEGDNTSPSIDATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGE REFWSLPLKVSPSTLIPRPDTERLVEVALDKTYGKQGAILDLGTGTGAIALALASEMPNRPVTGIDLRPEAQQLATENAQ RLNITNATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEKNDPHLSQGDVRFEPITALVAEEKGLADIRYISENARSF LENEGWLAFEHGYDQGLAVREIMQALGYLDVVTEKDYGGNDRVTLGRYCS
Sequences:
>Translated_290_residues MQSAYTVESALKSAIVQLQEGDNTSPSIDATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGE REFWSLPLKVSPSTLIPRPDTERLVEVALDKTYGKQGAILDLGTGTGAIALALASEMPNRPVTGIDLRPEAQQLATENAQ RLNITNATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEKNDPHLSQGDVRFEPITALVAEEKGLADIRYISENARSF LENEGWLAFEHGYDQGLAVREIMQALGYLDVVTEKDYGGNDRVTLGRYCS >Mature_290_residues MQSAYTVESALKSAIVQLQEGDNTSPSIDATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGE REFWSLPLKVSPSTLIPRPDTERLVEVALDKTYGKQGAILDLGTGTGAIALALASEMPNRPVTGIDLRPEAQQLATENAQ RLNITNATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEKNDPHLSQGDVRFEPITALVAEEKGLADIRYISENARSF LENEGWLAFEHGYDQGLAVREIMQALGYLDVVTEKDYGGNDRVTLGRYCS
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=282, Percent_Identity=33.6879432624113, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1787463, Length=278, Percent_Identity=53.2374100719424, Blast_Score=279, Evalue=1e-76, Organism=Escherichia coli, GI87082085, Length=220, Percent_Identity=30.9090909090909, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324266, Length=169, Percent_Identity=32.5443786982249, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI24582226, Length=219, Percent_Identity=31.0502283105023, Blast_Score=104, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 32152; Mature: 32152
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSAYTVESALKSAIVQLQEGDNTSPSIDATVLLCHALDKPRSYLLTWPEKHLTSEQESE CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHHHCCCCCEEEECCHHHCCCCHHHH FNTLLKRRLTGEPVAYIVGEREFWSLPLKVSPSTLIPRPDTERLVEVALDKTYGKQGAIL HHHHHHHHCCCCCEEEEECCHHHEECCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEE DLGTGTGAIALALASEMPNRPVTGIDLRPEAQQLATENAQRLNITNATFLHGSWFEPLNS EECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEECCCHHHHHHH VNSEEKAVKFSLIVSNPPYIEKNDPHLSQGDVRFEPITALVAEEKGLADIRYISENARSF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECHHHHEECCCCCCHHHHHHHHHHHHH LENEGWLAFEHGYDQGLAVREIMQALGYLDVVTEKDYGGNDRVTLGRYCS HHCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCC >Mature Secondary Structure MQSAYTVESALKSAIVQLQEGDNTSPSIDATVLLCHALDKPRSYLLTWPEKHLTSEQESE CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHHHCCCCCEEEECCHHHCCCCHHHH FNTLLKRRLTGEPVAYIVGEREFWSLPLKVSPSTLIPRPDTERLVEVALDKTYGKQGAIL HHHHHHHHCCCCCEEEEECCHHHEECCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEE DLGTGTGAIALALASEMPNRPVTGIDLRPEAQQLATENAQRLNITNATFLHGSWFEPLNS EECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEEECCCHHHHHHH VNSEEKAVKFSLIVSNPPYIEKNDPHLSQGDVRFEPITALVAEEKGLADIRYISENARSF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECHHHHEECCCCCCHHHHHHHHHHHHH LENEGWLAFEHGYDQGLAVREIMQALGYLDVVTEKDYGGNDRVTLGRYCS HHCCCCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]