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The map label for this gene is ykgB [H]

Identifier: 218708747

GI number: 218708747

Start: 763261

End: 764301

Strand: Reverse

Name: ykgB [H]

Synonym: VS_0726

Alternate gene names: 218708747

Gene position: 764301-763261 (Counterclockwise)

Preceding gene: 218708748

Following gene: 218708745

Centisome position: 23.17

GC content: 42.56

Gene sequence:

>1041_bases
ATGAAAACCCTCCCTTTAACGATCGGTTGCTACACAGATTCTCCAAGTAATAGCCAAGGTGTATATCAAACTCAGTTAGA
TCTAGAAACGGGAACGCTGTTGCCTTTAGAGCTTATAGCGGCCTGTACAAATCCTTCGTTTGTCACCACGACAAAGCTAG
GGATCTATACAGCTTCTGAAGTTGACCAAAAGATGCAACCGCAACTGATTCATATACCGAATTCTGATTCAACAATAGCG
TCAAATACTAGACTAATTTCAGGAGATCACCCTTGTCATATCACGGTAGATCCCCACAATAAGTTTGCTATTACATCGCA
ATATTCATCAGGGGCATTCGATATCTTTAGTTTAAGTATCAATGGCAATATCGATAAACGGCTCAAAACACTCAAAATGG
TTGGTTCTGGACCTAATGCAGAAAGACAAACAGGCCCACATGCACATCAAAGCCTTTTCCTAAAGAACTCTCCGCAGTTT
GTCACCGTCGATCTCGGAGCCGATCGAATCAACTTCTATTGCTTTGACGAAGAGCAAGAAGAGTTCCTTGATGAACCAAT
GCAATCTATCAAAGTGCGGGCAGGGAATGGACCTCGTCACTTAATCTTTAACCAAGCCGAAGATAGAGCCTATGTGGTGT
GTGAGCTCTCTGAAACGATATTGATTTTGGAAAAGTCTTTAGGGGTGTGGAGTATTGTGGAAGAGGTTGATGCATTAGCA
AATATGGATAAAGGAGAAGCAGCGGCTGCAATTAAGCTATCGCCAGATGAGCAATTCCTTTATGTGTCTTGCCGACATCA
ATCCAGAATCAGTTGTTTTAGAATAGACTCCGTCACTCAAAAGCTCATTTTTATGGATAGTTACGATGTTGAAGGCAAGT
TCCCTCGCGACTTTCATATCACTAATGACGGACAATGGCTTATCGCCGCAAACCAGCATTCCAACAACCTCACATCATTC
AAACGAGATATTGAAGATGGCTCCCTCACCTATACTGGATGCTCTTTAGCCATTGATGCACCTGTTTGTGTGACGCAATA
G

Upstream 100 bases:

>100_bases
CTGCAAGCCAAGTCACCAAGTATTCTCTCCTATAACCTCACTTTTACTACGATTTTATTAGACAATGTCTGCTCCATTTC
CTAACTGAGTATGACTGCCT

Downstream 100 bases:

>100_bases
CACTAAGCACTATCATGAAATCAAAAAAGGAGAGCCTCAGCTCTCCTTCTTTTATAACTAGATAACTTGGAGTAACCAAT
CACAACCCTAAAGCGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKTLPLTIGCYTDSPSNSQGVYQTQLDLETGTLLPLELIAACTNPSFVTTTKLGIYTASEVDQKMQPQLIHIPNSDSTIA
SNTRLISGDHPCHITVDPHNKFAITSQYSSGAFDIFSLSINGNIDKRLKTLKMVGSGPNAERQTGPHAHQSLFLKNSPQF
VTVDLGADRINFYCFDEEQEEFLDEPMQSIKVRAGNGPRHLIFNQAEDRAYVVCELSETILILEKSLGVWSIVEEVDALA
NMDKGEAAAAIKLSPDEQFLYVSCRHQSRISCFRIDSVTQKLIFMDSYDVEGKFPRDFHITNDGQWLIAANQHSNNLTSF
KRDIEDGSLTYTGCSLAIDAPVCVTQ

Sequences:

>Translated_346_residues
MKTLPLTIGCYTDSPSNSQGVYQTQLDLETGTLLPLELIAACTNPSFVTTTKLGIYTASEVDQKMQPQLIHIPNSDSTIA
SNTRLISGDHPCHITVDPHNKFAITSQYSSGAFDIFSLSINGNIDKRLKTLKMVGSGPNAERQTGPHAHQSLFLKNSPQF
VTVDLGADRINFYCFDEEQEEFLDEPMQSIKVRAGNGPRHLIFNQAEDRAYVVCELSETILILEKSLGVWSIVEEVDALA
NMDKGEAAAAIKLSPDEQFLYVSCRHQSRISCFRIDSVTQKLIFMDSYDVEGKFPRDFHITNDGQWLIAANQHSNNLTSF
KRDIEDGSLTYTGCSLAIDAPVCVTQ
>Mature_346_residues
MKTLPLTIGCYTDSPSNSQGVYQTQLDLETGTLLPLELIAACTNPSFVTTTKLGIYTASEVDQKMQPQLIHIPNSDSTIA
SNTRLISGDHPCHITVDPHNKFAITSQYSSGAFDIFSLSINGNIDKRLKTLKMVGSGPNAERQTGPHAHQSLFLKNSPQF
VTVDLGADRINFYCFDEEQEEFLDEPMQSIKVRAGNGPRHLIFNQAEDRAYVVCELSETILILEKSLGVWSIVEEVDALA
NMDKGEAAAAIKLSPDEQFLYVSCRHQSRISCFRIDSVTQKLIFMDSYDVEGKFPRDFHITNDGQWLIAANQHSNNLTSF
KRDIEDGSLTYTGCSLAIDAPVCVTQ

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=340, Percent_Identity=24.7058823529412, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 38351; Mature: 38351

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLPLTIGCYTDSPSNSQGVYQTQLDLETGTLLPLELIAACTNPSFVTTTKLGIYTASE
CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEEEHHH
VDQKMQPQLIHIPNSDSTIASNTRLISGDHPCHITVDPHNKFAITSQYSSGAFDIFSLSI
HHHCCCCEEEEECCCCCEEECCCEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEE
NGNIDKRLKTLKMVGSGPNAERQTGPHAHQSLFLKNSPQFVTVDLGADRINFYCFDEEQE
CCCHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEECCCCEEEEEECCCEEEEEEECCHHH
EFLDEPMQSIKVRAGNGPRHLIFNQAEDRAYVVCELSETILILEKSLGVWSIVEEVDALA
HHHHCHHHEEEEEECCCCEEEEEECCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHH
NMDKGEAAAAIKLSPDEQFLYVSCRHQSRISCFRIDSVTQKLIFMDSYDVEGKFPRDFHI
CCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEE
TNDGQWLIAANQHSNNLTSFKRDIEDGSLTYTGCSLAIDAPVCVTQ
ECCCCEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEEECCCEEECC
>Mature Secondary Structure
MKTLPLTIGCYTDSPSNSQGVYQTQLDLETGTLLPLELIAACTNPSFVTTTKLGIYTASE
CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEEEHHH
VDQKMQPQLIHIPNSDSTIASNTRLISGDHPCHITVDPHNKFAITSQYSSGAFDIFSLSI
HHHCCCCEEEEECCCCCEEECCCEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEE
NGNIDKRLKTLKMVGSGPNAERQTGPHAHQSLFLKNSPQFVTVDLGADRINFYCFDEEQE
CCCHHHHHHEEEEECCCCCCCCCCCCCHHHEEEEECCCCEEEEEECCCEEEEEEECCHHH
EFLDEPMQSIKVRAGNGPRHLIFNQAEDRAYVVCELSETILILEKSLGVWSIVEEVDALA
HHHHCHHHEEEEEECCCCEEEEEECCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHH
NMDKGEAAAAIKLSPDEQFLYVSCRHQSRISCFRIDSVTQKLIFMDSYDVEGKFPRDFHI
CCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEE
TNDGQWLIAANQHSNNLTSFKRDIEDGSLTYTGCSLAIDAPVCVTQ
ECCCCEEEEECCCCCCHHHHHHCCCCCCEEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]