Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708708
Identifier: 218708708
GI number: 218708708
Start: 720946
End: 722292
Strand: Direct
Name: 218708708
Synonym: VS_0687
Alternate gene names: NA
Gene position: 720946-722292 (Clockwise)
Preceding gene: 218708703
Following gene: 218708713
Centisome position: 21.85
GC content: 46.55
Gene sequence:
>1347_bases ATGAAATATTCACCTATACTCGCTGTAGCGTTGTCAGCCCTATTCATTGTAGGGTGTAATGATGACGATCAACCAACAAC CCAGCTGCAAGCTGTTCACGCATCGCCAGATGCTCCACTAGCTAATGTGTTAGTTAATAGTCAGGCTCGTTGGACTGGGG TTGATTATGCTCAGGCATCTGGATATACCTCGGTCAATCAAGGGCAGACAACTCTACAGGTCGATGTTCAACTCCCTGGA GATGGTGTGGCGACAGTGATTCCGCCAAGCCAGTTCGATTTAAGCGGTGATTTAGATTACACGGTGATGGTGGTCGGTGA TGCTGACGGTTCCAACAACCCAGTTGAGGCTCTCGTTGTGACACGACCTGCAGCAGGCACGGCGACGAGTTCGAGTTTGG ATGTGCAAGTTGTTCACGCGGCAACTGGAGTTGGTGATGTGAATCTATACGTTACAGCGCCGAATGATCCTCTAGGCGCA CCGATTGGAACTTTGGGATACAAAGGGTTCACTGATGTGCTAAACATACCTGCAGGACAATATCGAGTGAGATTAGAAAC CGTGAGTGGAAGTGCTATCGCGTTTGATTCAGGAGAGATCACTCTCCCTGCTGGTAGCGAGCTGACCATTGCGGCAGTCC CAAGAGCGGATTCAAGCAGTACGTCTCCGGTGAAGCTGATGGTAATGGATGGCAAAAGTTCATCTATAATTTACGACATG GCAGAATCTGCAGAAGTGAGAGTAGGGCATTTAGTTGATGGTGCACCCTCTGTGGATGTGTATGTAAACTCGGCTAAGTT TGCTCCTCTTGATGCTCTAATGTTTAAAGAAGTTCGTGGCTTCTTAGATTTGGCAGCAGGCAGTTACGATATCGATATTT ATGAAACAGCAACCACCTCTCCAACATTCATTGATGTTGACGGTTTAGCGGTGTTTGCCGGAATGGATTACAGCATCTAT GCCGTAGGGACGGTAAGTCCTCTTAACTTGGAAGCTCTAGTTGTTCCAGAAAATCGACGCTCTGTTGCAACCAGTGCAGT ATTGAACATTACTCATGCTGCAGCTAATCCAATTGCAGCTTCGGTTGATATTTATTTAACCGAGAACGTGGGAATTTCTG GAAGTACTCCTGCGTTGAGTAATGTGAAATTCAAAGATTTCGCGAATGGTATTTATGTAGCTGCGGGAACTTACTATGTG ACGATTACGGTGGCTGGCGATCCATCTACTGTTGCTATTGACTCCGCGCCTGCTACCTTAGTTAACGGTGTTGTGTATCA AGTAGTGGCGATTGATGATTCGATGGGAACGGGATTTAACTTAATAGTAAGTGAAACCACAGATTAA
Upstream 100 bases:
>100_bases AGACCGTTCATTGCACCAATTTTGAGGCAACATTTAAAGATCTGCTCCTGAGCTTATCTGCTGTGTGACGAACTGGTCGA ACTTTTTGGAGAGAAGACCA
Downstream 100 bases:
>100_bases TCCGTTAAGCGTCTGCAAATAGAAAATAGAAAAGAGAAGAGGGTAGCTCAATGCTCCCCTCTTCTCTTTTGCTTTTTTTT CTTTTATTCGTGGTTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKYSPILAVALSALFIVGCNDDDQPTTQLQAVHASPDAPLANVLVNSQARWTGVDYAQASGYTSVNQGQTTLQVDVQLPG DGVATVIPPSQFDLSGDLDYTVMVVGDADGSNNPVEALVVTRPAAGTATSSSLDVQVVHAATGVGDVNLYVTAPNDPLGA PIGTLGYKGFTDVLNIPAGQYRVRLETVSGSAIAFDSGEITLPAGSELTIAAVPRADSSSTSPVKLMVMDGKSSSIIYDM AESAEVRVGHLVDGAPSVDVYVNSAKFAPLDALMFKEVRGFLDLAAGSYDIDIYETATTSPTFIDVDGLAVFAGMDYSIY AVGTVSPLNLEALVVPENRRSVATSAVLNITHAAANPIAASVDIYLTENVGISGSTPALSNVKFKDFANGIYVAAGTYYV TITVAGDPSTVAIDSAPATLVNGVVYQVVAIDDSMGTGFNLIVSETTD
Sequences:
>Translated_448_residues MKYSPILAVALSALFIVGCNDDDQPTTQLQAVHASPDAPLANVLVNSQARWTGVDYAQASGYTSVNQGQTTLQVDVQLPG DGVATVIPPSQFDLSGDLDYTVMVVGDADGSNNPVEALVVTRPAAGTATSSSLDVQVVHAATGVGDVNLYVTAPNDPLGA PIGTLGYKGFTDVLNIPAGQYRVRLETVSGSAIAFDSGEITLPAGSELTIAAVPRADSSSTSPVKLMVMDGKSSSIIYDM AESAEVRVGHLVDGAPSVDVYVNSAKFAPLDALMFKEVRGFLDLAAGSYDIDIYETATTSPTFIDVDGLAVFAGMDYSIY AVGTVSPLNLEALVVPENRRSVATSAVLNITHAAANPIAASVDIYLTENVGISGSTPALSNVKFKDFANGIYVAAGTYYV TITVAGDPSTVAIDSAPATLVNGVVYQVVAIDDSMGTGFNLIVSETTD >Mature_448_residues MKYSPILAVALSALFIVGCNDDDQPTTQLQAVHASPDAPLANVLVNSQARWTGVDYAQASGYTSVNQGQTTLQVDVQLPG DGVATVIPPSQFDLSGDLDYTVMVVGDADGSNNPVEALVVTRPAAGTATSSSLDVQVVHAATGVGDVNLYVTAPNDPLGA PIGTLGYKGFTDVLNIPAGQYRVRLETVSGSAIAFDSGEITLPAGSELTIAAVPRADSSSTSPVKLMVMDGKSSSIIYDM AESAEVRVGHLVDGAPSVDVYVNSAKFAPLDALMFKEVRGFLDLAAGSYDIDIYETATTSPTFIDVDGLAVFAGMDYSIY AVGTVSPLNLEALVVPENRRSVATSAVLNITHAAANPIAASVDIYLTENVGISGSTPALSNVKFKDFANGIYVAAGTYYV TITVAGDPSTVAIDSAPATLVNGVVYQVVAIDDSMGTGFNLIVSETTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46252; Mature: 46252
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSPILAVALSALFIVGCNDDDQPTTQLQAVHASPDAPLANVLVNSQARWTGVDYAQAS CCCCHHHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHEEECCCCCEECCCHHHCC GYTSVNQGQTTLQVDVQLPGDGVATVIPPSQFDLSGDLDYTVMVVGDADGSNNPVEALVV CCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE TRPAAGTATSSSLDVQVVHAATGVGDVNLYVTAPNDPLGAPIGTLGYKGFTDVLNIPAGQ ECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCC YRVRLETVSGSAIAFDSGEITLPAGSELTIAAVPRADSSSTSPVKLMVMDGKSSSIIYDM EEEEEEEECCCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEE AESAEVRVGHLVDGAPSVDVYVNSAKFAPLDALMFKEVRGFLDLAAGSYDIDIYETATTS CCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC PTFIDVDGLAVFAGMDYSIYAVGTVSPLNLEALVVPENRRSVATSAVLNITHAAANPIAA CCEEEECCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHEEEEEEEEHHCCCCEEE SVDIYLTENVGISGSTPALSNVKFKDFANGIYVAAGTYYVTITVAGDPSTVAIDSAPATL EEEEEEEECCCCCCCCCCCCCEEHHHHCCCEEEEECEEEEEEEECCCCCEEEECCCCHHH VNGVVYQVVAIDDSMGTGFNLIVSETTD HCCEEEEEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MKYSPILAVALSALFIVGCNDDDQPTTQLQAVHASPDAPLANVLVNSQARWTGVDYAQAS CCCCHHHHHHEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHEEECCCCCEECCCHHHCC GYTSVNQGQTTLQVDVQLPGDGVATVIPPSQFDLSGDLDYTVMVVGDADGSNNPVEALVV CCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE TRPAAGTATSSSLDVQVVHAATGVGDVNLYVTAPNDPLGAPIGTLGYKGFTDVLNIPAGQ ECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCC YRVRLETVSGSAIAFDSGEITLPAGSELTIAAVPRADSSSTSPVKLMVMDGKSSSIIYDM EEEEEEEECCCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEE AESAEVRVGHLVDGAPSVDVYVNSAKFAPLDALMFKEVRGFLDLAAGSYDIDIYETATTS CCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC PTFIDVDGLAVFAGMDYSIYAVGTVSPLNLEALVVPENRRSVATSAVLNITHAAANPIAA CCEEEECCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHEEEEEEEEHHCCCCEEE SVDIYLTENVGISGSTPALSNVKFKDFANGIYVAAGTYYVTITVAGDPSTVAIDSAPATL EEEEEEEECCCCCCCCCCCCCEEHHHHCCCEEEEECEEEEEEEECCCCCEEEECCCCHHH VNGVVYQVVAIDDSMGTGFNLIVSETTD HCCEEEEEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA