| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708687
Identifier: 218708687
GI number: 218708687
Start: 695067
End: 696098
Strand: Reverse
Name: 218708687
Synonym: VS_0666
Alternate gene names: NA
Gene position: 696098-695067 (Counterclockwise)
Preceding gene: 218708688
Following gene: 218708684
Centisome position: 21.1
GC content: 49.71
Gene sequence:
>1032_bases ATGGCTTACTTTTCACTAGCCTTCGGTACGGCAACCAAAAACCGCGACAATAACATCATTGAAGCGTTCTTCCCTAACCC ACTTCTAAACCCAAGCGACGCTCTTGTTGCGGCTGTTGGTGAAGTTGCAGGTTACACTGAAGGCAACCAAGCTATCGAAA TCTCTGCTGCACAAAGCGCAGAACTAGCGAAAGCATTCGCAGCAAACGACGATGCAGCAAACGCATCTTTCGCAGAAAAA GCAGCAGCATCTGAGCAACCTCTTGTTCTTATTGTTCTTGCGACTGACGAGAAGCCAGCATCAGTTGCTGAAGGCTTCCT GAAGCTGCAACTTATCTCTAACCGCCTAGTTCAACCACACGGTACGGTACTAGACGGTATCTTCGGTCTACTGCACAACA TCGCATGGACTAACGAAGGCCCTATCGATCTTCCTGAGCTGGCTGAGCGTCAAATCGAAGCTCGCCTAGCGGGTCGTGCT CTGTCTGTAGATTGCGTAGACAAGTTCCCTAAAATGGTGGACTACGTAGTACCAACAGGCATTCGTATTGCTGACACTTC TCGTGTTCGTCTTGGCGCACACGTAGGCGAAGGCACAACAGTAATGCACGAAGGTTTCATCAACTTCAATGCGGGTACTA CTGGCGTGAGCATGGTTGAAGGCCGTATCTCTGCGGGTGTTGTTGTGGGTAACGGTTCAGACATCGGCGGCGGCGCTTCT ATCATGGGTACTCTGTCGGGTGGCGGTACTATGGTTATCTCTATCGGCGAAAACTGCCTACTAGGCGCAAATGCGGGTCT TGGTTTCCCAATGGGCGACCGTTGTACGGTTGAGTCAGGTCTTTACGTGACTGCGGGTACTAAGGTTCGCATGTTAGATA AAGAAGGCAACGAAGTAGAAATCATTAAAGCTCGTGACCTTGCTGGCGTTTCTGATCTTCTGTTCCGTCGTAACTCGATT ACTGGCCAAATTGAATGTCTAGCGAACAAGTCAGCTGTTGAACTGAACAGCGAGCTACACAGCAACAACTAA
Upstream 100 bases:
>100_bases TGATGAACGCAATTAAATTAACTTTGCTAACGGCAGCGCTTGTTATTCGAGCCGCTGTTATGAAATAGCAAAATCAAGAC TCAACACATGGAGATTCAAC
Downstream 100 bases:
>100_bases TCTACGCACTAGATGCTAAATTACTAGATACTAAAAAACACGAAGCCGCTGGAGGTAAATCCAGCGGCTTTTCTTTTATC TATATAAAACGGAAAGCGTT
Product: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAYFSLAFGTATKNRDNNIIEAFFPNPLLNPSDALVAAVGEVAGYTEGNQAIEISAAQSAELAKAFAANDDAANASFAEK AAASEQPLVLIVLATDEKPASVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRA LSVDCVDKFPKMVDYVVPTGIRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS IMGTLSGGGTMVISIGENCLLGANAGLGFPMGDRCTVESGLYVTAGTKVRMLDKEGNEVEIIKARDLAGVSDLLFRRNSI TGQIECLANKSAVELNSELHSNN
Sequences:
>Translated_343_residues MAYFSLAFGTATKNRDNNIIEAFFPNPLLNPSDALVAAVGEVAGYTEGNQAIEISAAQSAELAKAFAANDDAANASFAEK AAASEQPLVLIVLATDEKPASVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRA LSVDCVDKFPKMVDYVVPTGIRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS IMGTLSGGGTMVISIGENCLLGANAGLGFPMGDRCTVESGLYVTAGTKVRMLDKEGNEVEIIKARDLAGVSDLLFRRNSI TGQIECLANKSAVELNSELHSNN >Mature_342_residues AYFSLAFGTATKNRDNNIIEAFFPNPLLNPSDALVAAVGEVAGYTEGNQAIEISAAQSAELAKAFAANDDAANASFAEKA AASEQPLVLIVLATDEKPASVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRAL SVDCVDKFPKMVDYVVPTGIRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGASI MGTLSGGGTMVISIGENCLLGANAGLGFPMGDRCTVESGLYVTAGTKVRMLDKEGNEVEIIKARDLAGVSDLLFRRNSIT GQIECLANKSAVELNSELHSNN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 35777; Mature: 35646
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFSLAFGTATKNRDNNIIEAFFPNPLLNPSDALVAAVGEVAGYTEGNQAIEISAAQSA CEEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHH ELAKAFAANDDAANASFAEKAAASEQPLVLIVLATDEKPASVAEGFLKLQLISNRLVQPH HHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHEEEEHHCCCCCCC GTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRALSVDCVDKFPKMVDYVVPTG CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC IRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS EEEECCCEEEEEEECCCCCEEEEECEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCEE IMGTLSGGGTMVISIGENCLLGANAGLGFPMGDRCTVESGLYVTAGTKVRMLDKEGNEVE EEEEECCCCEEEEEECCCEEEECCCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCEEE IIKARDLAGVSDLLFRRNSITGQIECLANKSAVELNSELHSNN EEEECCCCCHHHHHHHCCCCCEEEEEEECCCCEEECCHHCCCC >Mature Secondary Structure AYFSLAFGTATKNRDNNIIEAFFPNPLLNPSDALVAAVGEVAGYTEGNQAIEISAAQSA EEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHH ELAKAFAANDDAANASFAEKAAASEQPLVLIVLATDEKPASVAEGFLKLQLISNRLVQPH HHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHEEEEHHCCCCCCC GTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRALSVDCVDKFPKMVDYVVPTG CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC IRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS EEEECCCEEEEEEECCCCCEEEEECEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCEE IMGTLSGGGTMVISIGENCLLGANAGLGFPMGDRCTVESGLYVTAGTKVRMLDKEGNEVE EEEEECCCCEEEEEECCCEEEECCCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCEEE IIKARDLAGVSDLLFRRNSITGQIECLANKSAVELNSELHSNN EEEECCCCCHHHHHHHCCCCCEEEEEEECCCCEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA