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The map label for this gene is yebA [C]

Identifier: 218708583

GI number: 218708583

Start: 572133

End: 573143

Strand: Reverse

Name: yebA [C]

Synonym: VS_0549

Alternate gene names: 218708583

Gene position: 573143-572133 (Counterclockwise)

Preceding gene: 218708584

Following gene: 218708579

Centisome position: 17.37

GC content: 45.0

Gene sequence:

>1011_bases
ATGTCTAAGAAAGTTTCCATTACAATCCCCTTAGCCCAAGGGGATCAGACGTTTTATTTCGGTCGAAAAGCCGTACTACT
ATGTACTACCGCAATTTTTTCAGTGCCTCTATTGATTGGCGGAGCCGCATACATGCACTTTGAGGGTAAACAAGAACTCG
CCCTCCAAGCCGATGATGCACAACAATTGATTGAAACACTGATTGTTGAAAAAGAACAAACCGACTTCCTTTACGCTGAG
CAGGTAGAAACCAATCACTCACTGTCTCAAGCATTAACCGAGAAAGAAGGCACTATTCAGTTACTTGGTAAGCGTGTATT
TGATGTGGAATCAGTGCTTGGCCTGACCGATGAAGAGCCGCTGACTGATGACGTCTCTTTAGAAGACCGAATTGATGCAG
CTGCAGTAGATTCGGCAGTCAGAGCCACAATGTTTCGTTTAATTCCAAATGACAGCCCTATGGCTTATCAACGCATATCA
TCCTCTTATGGCCGTCGCTCTAACCCTATAACAGGTAAACGCCACGTTCATACTGGTATCGACCTAACGTGTAAGCGTGG
TGAAGATATTGTCGCGCCAGCAGATGGCGTAATTGAAACCGTGCGCCCAAGTAAGAAAGGCTTCGGTAACTTTATAACTA
TGCGTCACTCATTCGGCTTCATGAGCTCTTATGCGCACCTACAGAAGTTCAAAGTACGTAGCGGTCAATTTGTGAGTAAA
GGCGATGTGATTGCGAGCTGTGGTAACTCAGGTAACTCAACCGGGCCACACTTGCACTATGAGGTACGCTTCCTTGGTCG
TTCATTGAACCCTCAATACTTGATGGATTGGACACCTGAGAACTTCAACTACGTGTTTGAGAAAGAGAAAAAGGTTAAGT
GGGGTCCATTGGTTCAACTGATTGATAATGTGGTTCGCTTGCAGATCAACCTGACTAACGTACCTTACATTAGCTCGACC
ATAGACACCGTATCGAGTGAAGATAGTAAGAAACCTATCACGACTAACTAG

Upstream 100 bases:

>100_bases
GAACTGCTTTATAGAGAGATTGAACACCTTACCGATTTAGGTAATGAGTGACGTCTCCATTCCCCTTTTTCTATTAGAAG
CATTTAGTTAATACAGAACC

Downstream 100 bases:

>100_bases
TTATTGGTTATTGAGGGATATTGATTTGGCCTATGATGATCTAATTGCTTTTAGCCTACAGTAGACCAAATGCTTTCATA
GCGTTCAGCACAAACAAAAA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSKKVSITIPLAQGDQTFYFGRKAVLLCTTAIFSVPLLIGGAAYMHFEGKQELALQADDAQQLIETLIVEKEQTDFLYAE
QVETNHSLSQALTEKEGTIQLLGKRVFDVESVLGLTDEEPLTDDVSLEDRIDAAAVDSAVRATMFRLIPNDSPMAYQRIS
SSYGRRSNPITGKRHVHTGIDLTCKRGEDIVAPADGVIETVRPSKKGFGNFITMRHSFGFMSSYAHLQKFKVRSGQFVSK
GDVIASCGNSGNSTGPHLHYEVRFLGRSLNPQYLMDWTPENFNYVFEKEKKVKWGPLVQLIDNVVRLQINLTNVPYISST
IDTVSSEDSKKPITTN

Sequences:

>Translated_336_residues
MSKKVSITIPLAQGDQTFYFGRKAVLLCTTAIFSVPLLIGGAAYMHFEGKQELALQADDAQQLIETLIVEKEQTDFLYAE
QVETNHSLSQALTEKEGTIQLLGKRVFDVESVLGLTDEEPLTDDVSLEDRIDAAAVDSAVRATMFRLIPNDSPMAYQRIS
SSYGRRSNPITGKRHVHTGIDLTCKRGEDIVAPADGVIETVRPSKKGFGNFITMRHSFGFMSSYAHLQKFKVRSGQFVSK
GDVIASCGNSGNSTGPHLHYEVRFLGRSLNPQYLMDWTPENFNYVFEKEKKVKWGPLVQLIDNVVRLQINLTNVPYISST
IDTVSSEDSKKPITTN
>Mature_335_residues
SKKVSITIPLAQGDQTFYFGRKAVLLCTTAIFSVPLLIGGAAYMHFEGKQELALQADDAQQLIETLIVEKEQTDFLYAEQ
VETNHSLSQALTEKEGTIQLLGKRVFDVESVLGLTDEEPLTDDVSLEDRIDAAAVDSAVRATMFRLIPNDSPMAYQRISS
SYGRRSNPITGKRHVHTGIDLTCKRGEDIVAPADGVIETVRPSKKGFGNFITMRHSFGFMSSYAHLQKFKVRSGQFVSKG
DVIASCGNSGNSTGPHLHYEVRFLGRSLNPQYLMDWTPENFNYVFEKEKKVKWGPLVQLIDNVVRLQINLTNVPYISSTI
DTVSSEDSKKPITTN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=121, Percent_Identity=41.3223140495868, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=38.3838383838384, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=32.9896907216495, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37376; Mature: 37245

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKVSITIPLAQGDQTFYFGRKAVLLCTTAIFSVPLLIGGAAYMHFEGKQELALQADDA
CCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCH
QQLIETLIVEKEQTDFLYAEQVETNHSLSQALTEKEGTIQLLGKRVFDVESVLGLTDEEP
HHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
LTDDVSLEDRIDAAAVDSAVRATMFRLIPNDSPMAYQRISSSYGRRSNPITGKRHVHTGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCC
DLTCKRGEDIVAPADGVIETVRPSKKGFGNFITMRHSFGFMSSYAHLQKFKVRSGQFVSK
EEEECCCCCEECCCCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEC
GDVIASCGNSGNSTGPHLHYEVRFLGRSLNPQYLMDWTPENFNYVFEKEKKVKWGPLVQL
CCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHH
IDNVVRLQINLTNVPYISSTIDTVSSEDSKKPITTN
HHHHEEEEEEECCCCEEHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKKVSITIPLAQGDQTFYFGRKAVLLCTTAIFSVPLLIGGAAYMHFEGKQELALQADDA
CCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCH
QQLIETLIVEKEQTDFLYAEQVETNHSLSQALTEKEGTIQLLGKRVFDVESVLGLTDEEP
HHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
LTDDVSLEDRIDAAAVDSAVRATMFRLIPNDSPMAYQRISSSYGRRSNPITGKRHVHTGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCC
DLTCKRGEDIVAPADGVIETVRPSKKGFGNFITMRHSFGFMSSYAHLQKFKVRSGQFVSK
EEEECCCCCEECCCCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEC
GDVIASCGNSGNSTGPHLHYEVRFLGRSLNPQYLMDWTPENFNYVFEKEKKVKWGPLVQL
CCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHH
IDNVVRLQINLTNVPYISSTIDTVSSEDSKKPITTN
HHHHEEEEEEECCCCEEHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]