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The map label for this gene is yehT [C]

Identifier: 218708574

GI number: 218708574

Start: 561180

End: 561911

Strand: Reverse

Name: yehT [C]

Synonym: VS_0540

Alternate gene names: 218708574

Gene position: 561911-561180 (Counterclockwise)

Preceding gene: 218708575

Following gene: 218708567

Centisome position: 17.03

GC content: 45.77

Gene sequence:

>732_bases
ATGTTAAAGGCATTAGTTGTCGATGATGAGCTTTTTGCTCGCGAAGAGCTGATTGAACTACTCACTGAAACCGGACAAGT
AGAAATCATTGGCCAAGCGAGTAACGCGATCGAAGGACTGAAACAGATCAATCTGCTCAAGCCTGATGTGGTGTATTTGG
ATATCCAAATGCCGCAGGTTACCGGAATTGAACTGTTAAGCATGCTTGATCCAGACACCATGCCCTACGTGGTATTCGTC
ACCGCCTACGACCAATATGCGATTCAAGCATTTGAAGACAATGCCTTTGACTACCTACTCAAGCCGGTTGAACCTTGTCG
ATTAAACAAGAGTGTTTGTCGTCTGAATAAGGTCATCAAGCAGAACCAGAAAGCGCCAGAACAAGATATATCTGCGATCG
CTCCCTGCCACTTAGAGCAGATCCCGTGTATCGGCCACAACCGCATTGTGATCATGGCGAGCCAAACGGTCGAGTGCGCC
TATTCAGATATCAGTGGTGTACATGTTCGTAGCTCCTCACAAACGGCGACCTCACCGTTGACGTTAAAGATCCTAGAAGA
AAAGACCGATTTGATCCGCTGTCATCGACAGTATTTGATCAACATAAAATCGATCCAAGAGATCAAACTGTTAGAGAATG
GATTAGCCGAGATCATCACACTTACCGGCTTTGAAGTGCCTGTAAGTCGTCGTTACTTAAAGGCTTTAAAAGAGCAACTC
GGTCTCCAGTAA

Upstream 100 bases:

>100_bases
TTTTCGGAGACGAATCACTCCGAGTTGAAACATTTAGAAGCCGACATTTAAAAGAAAAGCGTGAAACAAGCAGAGATAGA
ACCAAAATGAAGATTGTAGG

Downstream 100 bases:

>100_bases
CCCCATAAATTTCGACTTTTTTCCAAAGCACGATCAAAAAAGCCAACGCATCAACGTTGGCTTCCTGCTGTTTACAAATC
AATACTGTTTGCGAATCGAT

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLKALVVDDELFAREELIELLTETGQVEIIGQASNAIEGLKQINLLKPDVVYLDIQMPQVTGIELLSMLDPDTMPYVVFV
TAYDQYAIQAFEDNAFDYLLKPVEPCRLNKSVCRLNKVIKQNQKAPEQDISAIAPCHLEQIPCIGHNRIVIMASQTVECA
YSDISGVHVRSSSQTATSPLTLKILEEKTDLIRCHRQYLINIKSIQEIKLLENGLAEIITLTGFEVPVSRRYLKALKEQL
GLQ

Sequences:

>Translated_243_residues
MLKALVVDDELFAREELIELLTETGQVEIIGQASNAIEGLKQINLLKPDVVYLDIQMPQVTGIELLSMLDPDTMPYVVFV
TAYDQYAIQAFEDNAFDYLLKPVEPCRLNKSVCRLNKVIKQNQKAPEQDISAIAPCHLEQIPCIGHNRIVIMASQTVECA
YSDISGVHVRSSSQTATSPLTLKILEEKTDLIRCHRQYLINIKSIQEIKLLENGLAEIITLTGFEVPVSRRYLKALKEQL
GLQ
>Mature_243_residues
MLKALVVDDELFAREELIELLTETGQVEIIGQASNAIEGLKQINLLKPDVVYLDIQMPQVTGIELLSMLDPDTMPYVVFV
TAYDQYAIQAFEDNAFDYLLKPVEPCRLNKSVCRLNKVIKQNQKAPEQDISAIAPCHLEQIPCIGHNRIVIMASQTVECA
YSDISGVHVRSSSQTATSPLTLKILEEKTDLIRCHRQYLINIKSIQEIKLLENGLAEIITLTGFEVPVSRRYLKALKEQL
GLQ

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=245, Percent_Identity=49.3877551020408, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788724, Length=247, Percent_Identity=28.3400809716599, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27324; Mature: 27324

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR ; PS00369 PTS_HPR_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKALVVDDELFAREELIELLTETGQVEIIGQASNAIEGLKQINLLKPDVVYLDIQMPQV
CCEEEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCC
TGIELLSMLDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVEPCRLNKSVCRLNKVIK
HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHCCCCCHHCCHHHHHHHHHHH
QNQKAPEQDISAIAPCHLEQIPCIGHNRIVIMASQTVECAYSDISGVHVRSSSQTATSPL
HCCCCCHHHHHHHCCCCHHCCCCCCCCEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCE
TLKILEEKTDLIRCHRQYLINIKSIQEIKLLENGLAEIITLTGFEVPVSRRYLKALKEQL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GLQ
CCC
>Mature Secondary Structure
MLKALVVDDELFAREELIELLTETGQVEIIGQASNAIEGLKQINLLKPDVVYLDIQMPQV
CCEEEEECHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCC
TGIELLSMLDPDTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVEPCRLNKSVCRLNKVIK
HHHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHCCCCCHHCCHHHHHHHHHHH
QNQKAPEQDISAIAPCHLEQIPCIGHNRIVIMASQTVECAYSDISGVHVRSSSQTATSPL
HCCCCCHHHHHHHCCCCHHCCCCCCCCEEEEEECCCHHHHHCCCCCEEEECCCCCCCCCE
TLKILEEKTDLIRCHRQYLINIKSIQEIKLLENGLAEIITLTGFEVPVSRRYLKALKEQL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GLQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]