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The map label for this gene is 218708522

Identifier: 218708522

GI number: 218708522

Start: 511619

End: 511861

Strand: Reverse

Name: 218708522

Synonym: VS_0487

Alternate gene names: NA

Gene position: 511861-511619 (Counterclockwise)

Preceding gene: 218708523

Following gene: 218708521

Centisome position: 15.51

GC content: 40.33

Gene sequence:

>243_bases
ATGAAAGCGAGCGATGTGAAGACCTTAGATATGACGGTAAAAGCTTTATGTTATCGTCATGCGACAATCCATCACTCAGA
TAGAGAGCTTCAGTGTTGTTCTAATCTCTATCAAGAGAAGCTTAAAAAGCATGGCATAACACCGTCAATGACGCATGGTT
ATGACTGTTACCAATACTCGTTAGCTGAGCGCGTCATGGTATCCTTAAACAAGAGTTCTTACTTACTCAGTGAAAGGTCT
TAA

Upstream 100 bases:

>100_bases
AGAAGTCGTTCAGTCAAAACTAGAAGAGATTCTGGTGAGCGACATCACTTATGTTCATCAGTCGTAACCACTTGTCATAG
ATTATGAAGTCAACAATGAA

Downstream 100 bases:

>100_bases
CGAGGTAAAAGCGCTTGTTGAAGAGTCTATATATACGTATAACGAAATGAGGCCGCATCTCAGCCTAGACATGAACTCGC
CAAATGAGATGCATGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase; Transposase OrfB

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKASDVKTLDMTVKALCYRHATIHHSDRELQCCSNLYQEKLKKHGITPSMTHGYDCYQYSLAERVMVSLNKSSYLLSERS

Sequences:

>Translated_80_residues
MKASDVKTLDMTVKALCYRHATIHHSDRELQCCSNLYQEKLKKHGITPSMTHGYDCYQYSLAERVMVSLNKSSYLLSERS
>Mature_80_residues
MKASDVKTLDMTVKALCYRHATIHHSDRELQCCSNLYQEKLKKHGITPSMTHGYDCYQYSLAERVMVSLNKSSYLLSERS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9245; Mature: 9245

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASDVKTLDMTVKALCYRHATIHHSDRELQCCSNLYQEKLKKHGITPSMTHGYDCYQYS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LAERVMVSLNKSSYLLSERS
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKASDVKTLDMTVKALCYRHATIHHSDRELQCCSNLYQEKLKKHGITPSMTHGYDCYQYS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LAERVMVSLNKSSYLLSERS
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA