| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218708517
Identifier: 218708517
GI number: 218708517
Start: 505786
End: 506262
Strand: Reverse
Name: 218708517
Synonym: VS_0481
Alternate gene names: NA
Gene position: 506262-505786 (Counterclockwise)
Preceding gene: 218708521
Following gene: 218708515
Centisome position: 15.34
GC content: 43.19
Gene sequence:
>477_bases ATGAAGAGATTACTTATTCTTTTAGTCTTTGCTATGCCTGTCGTTTGTTCAGCGAACAGTTTACCGCTACTGAGCCGTTT GCCTTTGCTCCCCAGTCAAATCGATAGCTCTGCCCATAAGTTTTTTATCTCCACGCAAAGTACATCGAGTGAAAGCTTTG ATACGTGGACAGTAGACAGTGGTTATTCTTATAGCTTGTTTTCTGATGTGGATCTTTATGTCGGTACACGAATCAACACT GCTGCACTGAGATATGAGAGTGGATTCTTGAGTGGTGTTAGTTATCAGTTTTCCGAAAGAGTCTCTTTCAACAGCTCTCT ACACACCTATAACAATGAAACAGAAGACAGTGAGAAATCGGTAGCCGCAGAGCTTTCCAGCCGCGTGCAGCTAACCGACA ATCTAGATATGCATGCCACCCTTGATTATGAAGAGTGGCAACAAGGTGTTGAGGTAGGATTAGGGTTTCGCTTCTAA
Upstream 100 bases:
>100_bases AACAAAATGCTCTATCGATAGTACAGCGAACATACAAGTCCTGTGCTTTAATTGAACAATAACGTTCGAAAAACAATAAT AATGACATCAGGAGTGGGAA
Downstream 100 bases:
>100_bases TCTATCCCACTTCTTTATTGATGAGCCCGTTAAGATTCAATCAACAATTCCGTTGAAATTAACACACCATTCCAATCGGC ATAAATGTAATCACCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKRLLILLVFAMPVVCSANSLPLLSRLPLLPSQIDSSAHKFFISTQSTSSESFDTWTVDSGYSYSLFSDVDLYVGTRINT AALRYESGFLSGVSYQFSERVSFNSSLHTYNNETEDSEKSVAAELSSRVQLTDNLDMHATLDYEEWQQGVEVGLGFRF
Sequences:
>Translated_158_residues MKRLLILLVFAMPVVCSANSLPLLSRLPLLPSQIDSSAHKFFISTQSTSSESFDTWTVDSGYSYSLFSDVDLYVGTRINT AALRYESGFLSGVSYQFSERVSFNSSLHTYNNETEDSEKSVAAELSSRVQLTDNLDMHATLDYEEWQQGVEVGLGFRF >Mature_158_residues MKRLLILLVFAMPVVCSANSLPLLSRLPLLPSQIDSSAHKFFISTQSTSSESFDTWTVDSGYSYSLFSDVDLYVGTRINT AALRYESGFLSGVSYQFSERVSFNSSLHTYNNETEDSEKSVAAELSSRVQLTDNLDMHATLDYEEWQQGVEVGLGFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17708; Mature: 17708
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLILLVFAMPVVCSANSLPLLSRLPLLPSQIDSSAHKFFISTQSTSSESFDTWTVDS CHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHCCCCCEEEEEEECCCCCCCCCEEEECC GYSYSLFSDVDLYVGTRINTAALRYESGFLSGVSYQFSERVSFNSSLHTYNNETEDSEKS CCCEEEECCCEEEECCCCCHHEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHH VAAELSSRVQLTDNLDMHATLDYEEWQQGVEVGLGFRF HHHHHHHCEEEECCCCEEEEECHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRLLILLVFAMPVVCSANSLPLLSRLPLLPSQIDSSAHKFFISTQSTSSESFDTWTVDS CHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHCCCCCEEEEEEECCCCCCCCCEEEECC GYSYSLFSDVDLYVGTRINTAALRYESGFLSGVSYQFSERVSFNSSLHTYNNETEDSEKS CCCEEEECCCEEEECCCCCHHEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHH VAAELSSRVQLTDNLDMHATLDYEEWQQGVEVGLGFRF HHHHHHHCEEEECCCCEEEEECHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA