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The map label for this gene is 218708500

Identifier: 218708500

GI number: 218708500

Start: 480041

End: 480886

Strand: Reverse

Name: 218708500

Synonym: VS_0464

Alternate gene names: NA

Gene position: 480886-480041 (Counterclockwise)

Preceding gene: 218708501

Following gene: 218708476

Centisome position: 14.58

GC content: 45.39

Gene sequence:

>846_bases
ATGTTACTCGAAGGAATCGAAACTCTATTGGTGCTGAGTAAAGCAAAAACCATGAGCCGCACAGGTAGTTTGCTTTATAT
CAGCCAATCAGCGGTCAGCAAACGGATTGCGAATTTAGAAAAGAAGCTAGGTAAAAAGCTCATTGAACCGAGTGGCCGAC
AGATAAAACTCACACCAGATTCGATAGCATTAATCGAGAGTATTGGCCCGACATTCAATGAACTTCGCGGGCTTATTTAT
GAACAGCAAGAGTTGGAAGATACCACTCTCATCACCTTAGACAGCTCTAAGTCTCTGATAGCCGGTTATTTAGGTGAGAT
GATGGGCCAATTTATCCAGCAAGATAAATACATCACCATAACCACCAACCACACACCGAGAATCATAGAGCGAGTACAAT
CTGGCAAGGCGACCTTGGGGTTGTGTGCTGGCTTACTGCCACCGCATCATGGGTTGATGACCTTCCATCTGTTTGATGAG
CCGTTTTACATAGTGAGTAAGTCACCGCTAACGGAGCTTCCTCCATTGGTGATTACCAACGATATGACCAACCCTGCCAA
CTCTTATCAACTTTCTGTATTAGAGAAGTTTGGTATCAAACCCTTGATGGAGATGGATGCCTACACCGCAGCGGCGCAAC
TTGCATTGGGCGGGACTGGGCCAGCGTTGATCCCGCTCTCTATCGTAAAAACACTCAATATTGAGCCTCAATACCTGTAT
AGCTTCACCGAATTAGCAGGCTTGATTCGGCCGATTCATATCTGTGTCAGACCGAATAGCTATCAGTCTCCACGAGTTAA
AACACTGATAGAATCCATTGTTGATGCTGTTCCCAAAGCAGTTTAG

Upstream 100 bases:

>100_bases
ATACCTAACTGAGTTCAAACCTTTAGTTTCAAATCTAGAGAATGAATAGCGTTTAAGGTAACTTGGTTCAATCATTCCCA
ACTTTCATGAATATCACTCA

Downstream 100 bases:

>100_bases
ACGCCATTAGCATCGACATCACGATCACAAGAGGGCGAATCCATTTCTGCCCTTTTGTCACCACCACTTTAGCGCCAAGC
TGAGCGCCCATAAATCCACC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLLEGIETLLVLSKAKTMSRTGSLLYISQSAVSKRIANLEKKLGKKLIEPSGRQIKLTPDSIALIESIGPTFNELRGLIY
EQQELEDTTLITLDSSKSLIAGYLGEMMGQFIQQDKYITITTNHTPRIIERVQSGKATLGLCAGLLPPHHGLMTFHLFDE
PFYIVSKSPLTELPPLVITNDMTNPANSYQLSVLEKFGIKPLMEMDAYTAAAQLALGGTGPALIPLSIVKTLNIEPQYLY
SFTELAGLIRPIHICVRPNSYQSPRVKTLIESIVDAVPKAV

Sequences:

>Translated_281_residues
MLLEGIETLLVLSKAKTMSRTGSLLYISQSAVSKRIANLEKKLGKKLIEPSGRQIKLTPDSIALIESIGPTFNELRGLIY
EQQELEDTTLITLDSSKSLIAGYLGEMMGQFIQQDKYITITTNHTPRIIERVQSGKATLGLCAGLLPPHHGLMTFHLFDE
PFYIVSKSPLTELPPLVITNDMTNPANSYQLSVLEKFGIKPLMEMDAYTAAAQLALGGTGPALIPLSIVKTLNIEPQYLY
SFTELAGLIRPIHICVRPNSYQSPRVKTLIESIVDAVPKAV
>Mature_281_residues
MLLEGIETLLVLSKAKTMSRTGSLLYISQSAVSKRIANLEKKLGKKLIEPSGRQIKLTPDSIALIESIGPTFNELRGLIY
EQQELEDTTLITLDSSKSLIAGYLGEMMGQFIQQDKYITITTNHTPRIIERVQSGKATLGLCAGLLPPHHGLMTFHLFDE
PFYIVSKSPLTELPPLVITNDMTNPANSYQLSVLEKFGIKPLMEMDAYTAAAQLALGGTGPALIPLSIVKTLNIEPQYLY
SFTELAGLIRPIHICVRPNSYQSPRVKTLIESIVDAVPKAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 30894; Mature: 30894

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEGIETLLVLSKAKTMSRTGSLLYISQSAVSKRIANLEKKLGKKLIEPSGRQIKLTPD
CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
SIALIESIGPTFNELRGLIYEQQELEDTTLITLDSSKSLIAGYLGEMMGQFIQQDKYITI
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEE
TTNHTPRIIERVQSGKATLGLCAGLLPPHHGLMTFHLFDEPFYIVSKSPLTELPPLVITN
ECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEC
DMTNPANSYQLSVLEKFGIKPLMEMDAYTAAAQLALGGTGPALIPLSIVKTLNIEPQYLY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHH
SFTELAGLIRPIHICVRPNSYQSPRVKTLIESIVDAVPKAV
HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLEGIETLLVLSKAKTMSRTGSLLYISQSAVSKRIANLEKKLGKKLIEPSGRQIKLTPD
CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
SIALIESIGPTFNELRGLIYEQQELEDTTLITLDSSKSLIAGYLGEMMGQFIQQDKYITI
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEE
TTNHTPRIIERVQSGKATLGLCAGLLPPHHGLMTFHLFDEPFYIVSKSPLTELPPLVITN
ECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEC
DMTNPANSYQLSVLEKFGIKPLMEMDAYTAAAQLALGGTGPALIPLSIVKTLNIEPQYLY
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHH
SFTELAGLIRPIHICVRPNSYQSPRVKTLIESIVDAVPKAV
HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1741267; 10952301 [H]