| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 218708436
GI number: 218708436
Start: 406642
End: 407085
Strand: Reverse
Name: yqeY [H]
Synonym: VS_0399
Alternate gene names: 218708436
Gene position: 407085-406642 (Counterclockwise)
Preceding gene: 218708437
Following gene: 218708435
Centisome position: 12.34
GC content: 42.34
Gene sequence:
>444_bases ATGGCTCTTATTGAACAACTCAAAGAAGAGCAAAAATTAGCGATGAAAGCCAAGGACAAACCGCGCCTTGGCACTATCCG CTTAGCTCTTTCAGCAATTAAGCAACGTGAAGTTGACGAACGGATCACTCTGAACGACGACGACATTATTGCTATATTAG TTAAAATGGTTAAGCAACGTCGCGATTCTGTTGCTCAATATGAATCGGCAAATCGTCAAGATCTTGCTGACGTGGAAAAA GCAGAAATTACGGTACTTGAAGGCTTTATGCCTCAACCGCTAACTGAAGAAGAAGTTATTGCACTACTTGATAGCGCAAT TGCAGAAGCTCAACCTGCGGGCATGCAAGACATGGGTAAAGTAATGGCTATCTTGAAACCACAAATTCAAGGGCGTGCAG ATATGGGTAAAGTTAGTGGTTTAGTTCGTTCTAAACTCGCTTAA
Upstream 100 bases:
>100_bases GCTAAAGCAGCAGCTCAAAAGCGTCACGCTAAAAAGCTAGCTCGCGAAAACGCACGTCGCGTTCGTCTGTACTAATAACT TAATCCATAAGGACTGAGTT
Downstream 100 bases:
>100_bases TCCCAAATCAAATTGCAACAAGCCGTGCAATCCTTCGGAACGCACGGCTTGTTTGTATCTGTAACCTATTCAAACTATTA TTATCCACACTCTCAGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MALIEQLKEEQKLAMKAKDKPRLGTIRLALSAIKQREVDERITLNDDDIIAILVKMVKQRRDSVAQYESANRQDLADVEK AEITVLEGFMPQPLTEEEVIALLDSAIAEAQPAGMQDMGKVMAILKPQIQGRADMGKVSGLVRSKLA
Sequences:
>Translated_147_residues MALIEQLKEEQKLAMKAKDKPRLGTIRLALSAIKQREVDERITLNDDDIIAILVKMVKQRRDSVAQYESANRQDLADVEK AEITVLEGFMPQPLTEEEVIALLDSAIAEAQPAGMQDMGKVMAILKPQIQGRADMGKVSGLVRSKLA >Mature_146_residues ALIEQLKEEQKLAMKAKDKPRLGTIRLALSAIKQREVDERITLNDDDIIAILVKMVKQRRDSVAQYESANRQDLADVEKA EITVLEGFMPQPLTEEEVIALLDSAIAEAQPAGMQDMGKVMAILKPQIQGRADMGKVSGLVRSKLA
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16283; Mature: 16152
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIEQLKEEQKLAMKAKDKPRLGTIRLALSAIKQREVDERITLNDDDIIAILVKMVKQR CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RDSVAQYESANRQDLADVEKAEITVLEGFMPQPLTEEEVIALLDSAIAEAQPAGMQDMGK HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VMAILKPQIQGRADMGKVSGLVRSKLA HHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ALIEQLKEEQKLAMKAKDKPRLGTIRLALSAIKQREVDERITLNDDDIIAILVKMVKQR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RDSVAQYESANRQDLADVEKAEITVLEGFMPQPLTEEEVIALLDSAIAEAQPAGMQDMGK HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VMAILKPQIQGRADMGKVSGLVRSKLA HHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]