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The map label for this gene is rpmE2

Identifier: 218703575

GI number: 218703575

Start: 356178

End: 356441

Strand: Reverse

Name: rpmE2

Synonym: ECUMN_0329

Alternate gene names: 218703575

Gene position: 356441-356178 (Counterclockwise)

Preceding gene: 218703576

Following gene: 218703574

Centisome position: 6.85

GC content: 45.08

Gene sequence:

>264_bases
ATGAAACCCAATATCCATCCTGAGTATCGTACTGTGGTGTTCCATGACACCAGTGTTGATGAGTACTTTAAAATCGGCTC
GACTATCAAAACAGACCGTGAGATTGAGCTGGATGGCGTAACGTATCCGTACGTGACAATTGATGTCTCTTCTAAATCGC
ACCCGTTCTATACAGGGAAGCTGAGAACAGTGGCATCAGAAGGAAATGTTGCACGATTCACCCAACGTTTTGGTCGTTTT
GTTAGCACGAAAAAGGGGGCATGA

Upstream 100 bases:

>100_bases
AAATTCCACATACCACAAATGGTCACAGGGATTGGGTGTTGAAATGATCCGGATGAGCATGTATCTTTACGGTTATGTTA
TAACATAACAGGTAAAAATG

Downstream 100 bases:

>100_bases
TGAAAGTCCTTAACTCTCTGCGTACCGCAAAAGAACGCCATCCAGACTGTCAGATTGTGAAGCGAAAAGGACGGCTATAT
GTGATTTGTAAATCTAATCC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRF
VSTKKGA

Sequences:

>Translated_87_residues
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRF
VSTKKGA
>Mature_87_residues
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRF
VSTKKGA

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=87, Percent_Identity=100, Blast_Score=178, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): R31B1_ECO57 (P0A7N3)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B85520
- PIR:   G90669
- RefSeq:   NP_286014.1
- RefSeq:   NP_308354.1
- ProteinModelPortal:   P0A7N3
- SMR:   P0A7N3
- EnsemblBacteria:   EBESCT00000024420
- EnsemblBacteria:   EBESCT00000058387
- GeneID:   914426
- GeneID:   957162
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0364
- KEGG:   ecs:ECs0327
- GeneTree:   EBGT00050000010886
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- BioCyc:   ECOL83334:ECS0327-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9920; Mature: 9920

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGK
CCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEECCEECCEEEEEECCCCCCEECCE
LRTVASEGNVARFTQRFGRFVSTKKGA
EEEEECCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGK
CCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCEEEECCEECCEEEEEECCCCCCEECCE
LRTVASEGNVARFTQRFGRFVSTKKGA
EEEEECCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796