Click here to switch to the map view.

The map label for this gene is 218703477

Identifier: 218703477

GI number: 218703477

Start: 256830

End: 258689

Strand: Reverse

Name: 218703477

Synonym: ECUMN_0225

Alternate gene names: NA

Gene position: 258689-256830 (Counterclockwise)

Preceding gene: 218703478

Following gene: 218703476

Centisome position: 4.97

GC content: 53.71

Gene sequence:

>1860_bases
TTGTGTGGAGTGATCTCTGTGGCTTTTGAAGAACGTTACTACCGCGAAGAGCTGGATTATCTTCGCCAGCTTGGCAAACT
GCTGGCGCAGGAAAAACCACATCTGGCCCACTTTCTGGCCGAGAAAGAGGGTGATCCGGACGTGGAGCGTCTGATGGAAG
CCTTTGCCTTTATGTCCGGTAGCCTGCGTCAGAAACTTGAGGACGAATTCCCCGAATTCACCCATGGGCTAATCCGTATG
CTGTGGGCAAACTATTTACGCCCAGTTCCGGCCATGACGGTTATTGCCTATGAACCCAAAACCGATCAGTTAAAAGTCCC
TGTTCAAGTCTGCCGTAATGAACTGATCAGAAGCCGCTCAGAAAAGTCCGCCCTGGCTGCTCAGAAGGTGCTGTCTGACA
ATCATGATAAAATCGTTTCTTCCGTAGCCTGTCATTTCACGCTGGCGCGCGATATCTGGCTGCAACCACTGCGCATTCTC
GACACCCACAACGCCAGCAGCCTGAAAGAAGGCATCATAGATATCAGTTTTACCGCAGATAACAATGTCTCCCCCGCCAT
GCTTGACCTGAACAAAATAACGTTCTGGCTGGGTAATGAAGACGATTATACCCGACACCAACTTTATCTGTGGTTTTGCG
AATGCCTGATGGATGCGGAACTGATTGCCGGAGAGTACCGCCTGCCGCTGCCGGATCTGTGGCTGGAGGCCGCCGGATTT
GAAAACCAGGACGCACTGCTGCCGTGGCCGAAAAATGTCCACAGCGGCTATCGGGTACTCCAGGAGTATTTCTGCTATCC
CGAAGCCTTCTTTTTTTTCCATCTGCGCGATGTTGCGCCACTACCGGACGATTTCCCGGCCAGCGCGTTTACGCTGCGCC
TGCACTTTAACCGCCCGTTACCTGCCGACATCAAGCTACGCCGGGACTCACTGCGTCTGCACTGTACGCCAGCCATTAAC
CTGTTTACGCATTATGCGGAACCCGTCAGGCCTGATGGGCGGATAGCGGAATACCCGCTGCGCGCCAGCCACCGGCATCC
CGACGCTTATGACATTTTTCAGATAAGCACAGTCACCAGCAAAGTCAAAGTTTCAGGTACTGAATCCAACCCTGGCAGCC
AGGCGCGTGTCTGGCCCGAATTTGAAAGTTTCCAGCACCAGATGGAGTACAGCCGCCAGCGGGAAGTCGTCTACTGGCAT
CACCGGACTAAAACATCCCTGTTTCACCGCGGGCTTGAACATAGTATCGCCTTTGTCCATGCGGACGGCAGCATTCCGGA
CAGCTCACGGTTTAATGATGATGTGATCACCACGTCATTAATCTGTACCAACCGTATGATCCCTGCTCGGCTGCATATCG
GCGATATCTGCGTGGCCGTCAACAAAAACCCGGCGGTGGCCTCATTTCATAATGTCACACGCCCGACGCAGCCGCTCTGG
CCAGTCACGGACGGCGACATGCACTGGTCGCTGATTTCCGCGATGAACCTGAACTACCTATCCCTGCTGGACAGGGAGAC
ACTGATCCAGATCCTGCGGACCTTCGACCTGCCAGGCGCTCACCATCCGCAGCGGGCCAGACTGTCGCGCCAGAAACTGG
ATGCCATAGAAAAACTCGAAACCAAACCTGTTGACAGGTTGTTTAAAGGCGTGCCGGTTCGCGGGCTGGCGACCACGCTG
TGGATACGTCCCGATCCATTTATCTGCGAAGGTGAAATTTATCTTCTTGGTACAGTGCTCTCGCACTTTTTTGCTCTCTA
CGCCAGCATCAATTCGTACCACTGTCTGAAAATCATCAACACGGAAAGTCAGGAGGCCTGGGAATGGCAGGAGAAAATGG
GTCAGCACGCCCTTATATAG

Upstream 100 bases:

>100_bases
CCCCTGTGGAACTACGTTTTCATATTGTGGCTACGGTCGATGTCAGCGAAACCAGGGGAGTGTTTGAATTTGACATTTTG
CTGGACAATCATCAACGCTA

Downstream 100 bases:

>100_bases
CGACAAAACCGCCGTTATCGGCGGATGTGCGCAACTGCAATTTCTATGTGCTGATGGAGGCGCTGTACCGTCGGTATGGC
GCTCCGGGCCAGGATATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MCGVISVAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSGSLRQKLEDEFPEFTHGLIRM
LWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRSEKSALAAQKVLSDNHDKIVSSVACHFTLARDIWLQPLRIL
DTHNASSLKEGIIDISFTADNNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGF
ENQDALLPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPASAFTLRLHFNRPLPADIKLRRDSLRLHCTPAIN
LFTHYAEPVRPDGRIAEYPLRASHRHPDAYDIFQISTVTSKVKVSGTESNPGSQARVWPEFESFQHQMEYSRQREVVYWH
HRTKTSLFHRGLEHSIAFVHADGSIPDSSRFNDDVITTSLICTNRMIPARLHIGDICVAVNKNPAVASFHNVTRPTQPLW
PVTDGDMHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLETKPVDRLFKGVPVRGLATTL
WIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIINTESQEAWEWQEKMGQHALI

Sequences:

>Translated_619_residues
MCGVISVAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSGSLRQKLEDEFPEFTHGLIRM
LWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRSEKSALAAQKVLSDNHDKIVSSVACHFTLARDIWLQPLRIL
DTHNASSLKEGIIDISFTADNNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGF
ENQDALLPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPASAFTLRLHFNRPLPADIKLRRDSLRLHCTPAIN
LFTHYAEPVRPDGRIAEYPLRASHRHPDAYDIFQISTVTSKVKVSGTESNPGSQARVWPEFESFQHQMEYSRQREVVYWH
HRTKTSLFHRGLEHSIAFVHADGSIPDSSRFNDDVITTSLICTNRMIPARLHIGDICVAVNKNPAVASFHNVTRPTQPLW
PVTDGDMHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLETKPVDRLFKGVPVRGLATTL
WIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIINTESQEAWEWQEKMGQHALI
>Mature_619_residues
MCGVISVAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSGSLRQKLEDEFPEFTHGLIRM
LWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRSEKSALAAQKVLSDNHDKIVSSVACHFTLARDIWLQPLRIL
DTHNASSLKEGIIDISFTADNNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGF
ENQDALLPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPASAFTLRLHFNRPLPADIKLRRDSLRLHCTPAIN
LFTHYAEPVRPDGRIAEYPLRASHRHPDAYDIFQISTVTSKVKVSGTESNPGSQARVWPEFESFQHQMEYSRQREVVYWH
HRTKTSLFHRGLEHSIAFVHADGSIPDSSRFNDDVITTSLICTNRMIPARLHIGDICVAVNKNPAVASFHNVTRPTQPLW
PVTDGDMHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLETKPVDRLFKGVPVRGLATTL
WIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIINTESQEAWEWQEKMGQHALI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71359; Mature: 71359

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGVISVAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
SLRQKLEDEFPEFTHGLIRMLWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRS
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHCCC
EKSALAAQKVLSDNHDKIVSSVACHFTLARDIWLQPLRILDTHNASSLKEGIIDISFTAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEEEECC
NNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGF
CCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
ENQDALLPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPASAFTLRLHFNRPL
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEHHHCCCCCCCCCCCEEEEEEEECCCC
PADIKLRRDSLRLHCTPAINLFTHYAEPVRPDGRIAEYPLRASHRHPDAYDIFQISTVTS
CCCEEEECCCEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECE
KVKVSGTESNPGSQARVWPEFESFQHQMEYSRQREVVYWHHRTKTSLFHRGLEHSIAFVH
EEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCEEEEE
ADGSIPDSSRFNDDVITTSLICTNRMIPARLHIGDICVAVNKNPAVASFHNVTRPTQPLW
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECEEEEEECCCCCEEHHHCCCCCCCCCC
PVTDGDMHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLE
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
TKPVDRLFKGVPVRGLATTLWIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIIN
CCCHHHHHCCCCCCCCEEEEEECCCCCEECCCCEEHHHHHHHHHHHHHHCCCEEEEEEEC
TESQEAWEWQEKMGQHALI
CCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCGVISVAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
SLRQKLEDEFPEFTHGLIRMLWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRS
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHCCC
EKSALAAQKVLSDNHDKIVSSVACHFTLARDIWLQPLRILDTHNASSLKEGIIDISFTAD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEEEECC
NNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGF
CCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
ENQDALLPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPASAFTLRLHFNRPL
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEHHHCCCCCCCCCCCEEEEEEEECCCC
PADIKLRRDSLRLHCTPAINLFTHYAEPVRPDGRIAEYPLRASHRHPDAYDIFQISTVTS
CCCEEEECCCEEEEECHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECE
KVKVSGTESNPGSQARVWPEFESFQHQMEYSRQREVVYWHHRTKTSLFHRGLEHSIAFVH
EEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCEEEEE
ADGSIPDSSRFNDDVITTSLICTNRMIPARLHIGDICVAVNKNPAVASFHNVTRPTQPLW
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECEEEEEECCCCCEEHHHCCCCCCCCCC
PVTDGDMHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLE
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
TKPVDRLFKGVPVRGLATTLWIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIIN
CCCHHHHHCCCCCCCCEEEEEECCCCCEECCCCEEHHHHHHHHHHHHHHCCCEEEEEEEC
TESQEAWEWQEKMGQHALI
CCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA