Definition | Escherichia coli IAI39 chromosome, complete genome. |
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Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is 218701009
Identifier: 218701009
GI number: 218701009
Start: 2789230
End: 2790174
Strand: Direct
Name: 218701009
Synonym: ECIAI39_2700
Alternate gene names: NA
Gene position: 2789230-2790174 (Clockwise)
Preceding gene: 218701008
Following gene: 218701010
Centisome position: 54.35
GC content: 48.25
Gene sequence:
>945_bases GTGGGCACGCAAACAGGATATGTACGTATGAGCAACGAAATTGCAATCACCAATGATGTGTTGGCTATTCGGGGAATCGA TGAAGTTACATGGAGCGCTCTGAAAAACAGTATTTACCCTGGGGCAAAAGATGAATCGGTAATGATGGCAGTCGATTACT GCCGGGCGCGTCAACTCGATCCTCTTCTTAAGCCGGTACACCTGGTACCAATGAGTGTTAAAGACTCGAAGAGTGGAAAG AATGAATGGCGCGACGTGGTCATGCCTGGCATTGGACTTTATCGCATTCAGGCCTACCGTTCCGGCGATTACGCAGGCGC TAATGAACCTGAGTTCGGTCCAGATGTAACACAAACGCTTTCAGGAGTGGAGGTTACCTTCCCTCAGTGGTGTAAGTACA CCGTCAGCAAGCGAATGGCAAGCGGGGAAATCGTAGAGTTTAGCGCCAAAGAATACTGGATTGAGAACTATGCAACTGGG GGGCGTGACACATCGGCACCAAATGCCATGTGGAAAAAGCGCCCTTATGCGCAGTTGGCAAAATGCGCAGAGGCACAGGC ATTACGTAAAGCATGGCCGGAGATTGGTCAACAAGCCACAGCTGAGGAAATGGAAGGTAAATATATCGACTCACCTGACA TTATTGAACGTGACGTAACTCCAAGAAGTCAGGCAAAGCACGGCACAGCATCCAGCATGAACAGTCTGATCAACGCTAAA ACAGTGAAAAAGCCTGATGAGCAAACGCGTAAAGCGGATAGCCGTGATCCAGAAGAAATGCTGATGGCCTTTACCAGCGC AGCGATGAATTACAGCACTGTCTCCGAACTGGATAAGGCTTACAAATACATTGCACAAAAACTTTCAGATGATGACGAAC TGCTGGCAAAAGCCACCGACGTTTACAGCGTTCGTCGGGAAGAATTAAACGAAACATCTATGTAA
Upstream 100 bases:
>100_bases TCGATGCCGGGCACGCTCTGTTCCGCCGGGATCTGAATACCTATCACGAATGCCGCATCAGCGATGAATGGGGCGGCGTG GAAATTATTAAACGCCCTGA
Downstream 100 bases:
>100_bases CCACCACCGCGGCGCCACGTGCGCCGCACTGCAACCAAGAGAGGTATTCATGAAAGGTGCATTAGGTAAGAAGGAACTCC TGGCGGTGGTGCCACTGTCA
Product: putative recombination protein from phage
Products: NA
Alternate protein names: Gifsy-2 Prophage RecT Fragment; Tail Tube Protein; Recombination Protein Phage; RecT Family Protein
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MGTQTGYVRMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLDPLLKPVHLVPMSVKDSKSGK NEWRDVVMPGIGLYRIQAYRSGDYAGANEPEFGPDVTQTLSGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATG GRDTSAPNAMWKKRPYAQLAKCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRSQAKHGTASSMNSLINAK TVKKPDEQTRKADSRDPEEMLMAFTSAAMNYSTVSELDKAYKYIAQKLSDDDELLAKATDVYSVRREELNETSM
Sequences:
>Translated_314_residues MGTQTGYVRMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLDPLLKPVHLVPMSVKDSKSGK NEWRDVVMPGIGLYRIQAYRSGDYAGANEPEFGPDVTQTLSGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATG GRDTSAPNAMWKKRPYAQLAKCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRSQAKHGTASSMNSLINAK TVKKPDEQTRKADSRDPEEMLMAFTSAAMNYSTVSELDKAYKYIAQKLSDDDELLAKATDVYSVRREELNETSM >Mature_313_residues GTQTGYVRMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLDPLLKPVHLVPMSVKDSKSGKN EWRDVVMPGIGLYRIQAYRSGDYAGANEPEFGPDVTQTLSGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATGG RDTSAPNAMWKKRPYAQLAKCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRSQAKHGTASSMNSLINAKT VKKPDEQTRKADSRDPEEMLMAFTSAAMNYSTVSELDKAYKYIAQKLSDDDELLAKATDVYSVRREELNETSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35107; Mature: 34976
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTQTGYVRMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLD CCCCCCEEEECCCEEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC PLLKPVHLVPMSVKDSKSGKNEWRDVVMPGIGLYRIQAYRSGDYAGANEPEFGPDVTQTL HHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH SGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATGGRDTSAPNAMWKKRPYAQLA CCCEECCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHH KCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRSQAKHGTASSMNSLINAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHH TVKKPDEQTRKADSRDPEEMLMAFTSAAMNYSTVSELDKAYKYIAQKLSDDDELLAKATD HCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VYSVRREELNETSM HHHHHHHHHHHCCC >Mature Secondary Structure GTQTGYVRMSNEIAITNDVLAIRGIDEVTWSALKNSIYPGAKDESVMMAVDYCRARQLD CCCCCEEEECCCEEEECCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC PLLKPVHLVPMSVKDSKSGKNEWRDVVMPGIGLYRIQAYRSGDYAGANEPEFGPDVTQTL HHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH SGVEVTFPQWCKYTVSKRMASGEIVEFSAKEYWIENYATGGRDTSAPNAMWKKRPYAQLA CCCEECCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHH KCAEAQALRKAWPEIGQQATAEEMEGKYIDSPDIIERDVTPRSQAKHGTASSMNSLINAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHH TVKKPDEQTRKADSRDPEEMLMAFTSAAMNYSTVSELDKAYKYIAQKLSDDDELLAKATD HCCCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VYSVRREELNETSM HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA