Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is yejM
Identifier: 218700660
GI number: 218700660
Start: 2398532
End: 2400292
Strand: Direct
Name: yejM
Synonym: ECIAI39_2329
Alternate gene names: 218700660
Gene position: 2398532-2400292 (Clockwise)
Preceding gene: 218700659
Following gene: 218700662
Centisome position: 46.74
GC content: 51.79
Gene sequence:
>1761_bases ATGGTAACTCATCGTCAGCGCTACCGTGAAAAAGTCTCCCAGATGGTCAGTTGGGGGCACTGGTTTGCACTGTTCAATAT TCTGCTTTCGCTCGTCATTGGCAGCCGTTACCTGTTTATCGCCGACTGGCCGACAACGCTTGCTGGTCGCATTTATTCCT ACGTAAGCATTATCGGTCATTTCAGCTTCCTGGTGTTCGCCACCTACTTACTGATCCTCTTCCCGCTGACCTTTATCGTC GGCTCCCAGAGGCTGATGAGGTTTTTGTCCGTCATTCTGGCAACGGCGGGAATGACGCTATTACTGATCGATAGCGAAGT CTTTACTCGTTTCCATCTCCATCTTAATCCCATCGTCTGGCAACTGGTTATCAACCCAGACGAAAATGAGATGGCGCGCG ACTGGCAGCTGATGTTCATCAGCGTGCCGGTTATTTTATTGCTTGAACTGGTGTTTGCGACGTGGAGCTGGCAAAAGCTA CGCAGCCTGACGCGTCGTCGGCGCTTCGCGCGCCCGCTGGCCGCATTCTTATTTATCGCCTTTATCGCCTCGCATGTGGT TTATATCTGGGCCGATGCCAACTTCTATCGCCCGATCACCATGCAACGCGCTAACCTGCCGCTTTCGTACCCGATGACGG CGCGACGTTTTCTTGAGAAGCATGGTCTGCTTGATGCGCAGGAGTATCAACGCCGTCTCATTGAGCAAGGTAATCCAGAC GCTGTTTCCGTTCAGTATCCGTTAAGCGAACTGCGCTATCGCGATATGGGCACCGGGCAGAATGTGCTGTTGATTACTGT CGATGGCCTGAACTACTCACGCTTCGAGAAGCAGATGCCTGCGCTGGCAGGTTTTGCTGAGCAAAATATTTCGTTCACGC GCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGATGGC ATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGA TGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGTACCCAATCCGACGAGC AGACCGCCACGCAGTGGATCAACTGGCTGGGCCGCTACGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAAT GGCACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGAT CAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTC CGCTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACG CCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGATCTGATGACGACGCTGATGCAACGCCTGCTACATGTCAGCAC ACCTGCCAGCGAATATTCGCAAGGTCAGGATTTGTTCAACCCTCAACGCCGTCATTACTGGGTTACTGCAGCGGATAACG ATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTGCTGAACAATAACGGTAAATACCGCACTTACAACTTACGTGGT GAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTACTGACAGATGAGAAGCGTTTTATCGCTAACTG A
Upstream 100 bases:
>100_bases GCCCCGGCCCAACGCCAGGCAATTGCCAACTCTTTTGCCCGCGCCTTACAGTCCTCTATCAACGAAGACAAAGCGCACTA AGGGAAACAGATAACAGGTT
Downstream 100 bases:
>100_bases TTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCAC GTAGCGCAGCCTGGTAGCGC
Product: putative hydrolase, inner membrane-associated
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIV GSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDG ILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFN GTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRG ERVKDEKPQLSLLLQVLTDEKRFIAN
Sequences:
>Translated_586_residues MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIV GSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDG ILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFN GTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRG ERVKDEKPQLSLLLQVLTDEKRFIAN >Mature_586_residues MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIV GSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDG ILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFN GTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRG ERVKDEKPQLSLLLQVLTDEKRFIAN
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842
Homologues:
Organism=Escherichia coli, GI1788515, Length=586, Percent_Identity=100, Blast_Score=1203, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YEJM_ECO57 (P0AD29)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: B85858 - PIR: H91013 - RefSeq: NP_288771.1 - RefSeq: NP_311107.1 - ProteinModelPortal: P0AD29 - EnsemblBacteria: EBESCT00000026466 - EnsemblBacteria: EBESCT00000058700 - GeneID: 916785 - GeneID: 957420 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z3447 - KEGG: ecs:ECs3080 - GeneTree: EBGT00050000011744 - HOGENOM: HBG296982 - OMA: SLVGHFS - ProtClustDB: CLSK880324 - BioCyc: ECOL83334:ECS3080-MONOMER - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 - Gene3D: G3DSA:3.40.720.10 - PIRSF: PIRSF004950
Pfam domain/function: PF00884 Sulfatase; SSF53649 Alkaline_phosphatase_core
EC number: NA
Molecular weight: Translated: 67297; Mature: 67297
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2352cf74)-; HASH(0x2054e834)-; HASH(0x236564cc)-; HASH(0x22f3a890)-; HASH(0x226aa308)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH FSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVW HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHEEEEEECCEEE QLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIA EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD HHHHCEEEEEECCCEECCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGN EEEEECCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC TTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLS CCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH DFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC GNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITT CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEC PKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN CCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCH >Mature Secondary Structure MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH FSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVW HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHEEEEEECCEEE QLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIA EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD HHHHCEEEEEECCCEECCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGN EEEEECCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC TTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLS CCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH DFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHC GNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITT CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEC PKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN CCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796