Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is yccJ
Identifier: 218700485
GI number: 218700485
Start: 2196465
End: 2196692
Strand: Direct
Name: yccJ
Synonym: ECIAI39_2151
Alternate gene names: 218700485
Gene position: 2196465-2196692 (Clockwise)
Preceding gene: 218700484
Following gene: 218700488
Centisome position: 42.8
GC content: 47.81
Gene sequence:
>228_bases ATGCCAACTCAAGAAGCGAAAGCTCATCACGTCGGTGAATGGGCATCTCTGCGCAATACGTCGCCGGAAATAGCCGAGGC CATTTTCGAAGTCGCCGGGTACGACGAAAAAATGGCGGAAAAGATTTGGGAAGAAGGTAGCGATGAAGTGTTAGTCAAAG CCTTTGCTAAGACCGACAAAGATTCGCTTTTTTGGGGCGAACAGACCATCGAACGTAAAAACGTTTAA
Upstream 100 bases:
>100_bases AGCCCAGCCAGGAAGAACTGTCTATTGCTCGTTATCAAGGGGAATATGTCGCAGGTCTGGCAGTTAAACTTAACGGCTAA TCTTCAACAGGAGGATACGC
Downstream 100 bases:
>100_bases CCAGCGACTCCCCCGTAGCGAACGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATT GGGCAGAAACCGTTGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
Sequences:
>Translated_75_residues MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV >Mature_74_residues PTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787238, Length=75, Percent_Identity=100, Blast_Score=154, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YCCJ_ECO57 (P0AB16)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: C85636 - PIR: G90773 - RefSeq: NP_286940.1 - RefSeq: NP_309186.1 - EnsemblBacteria: EBESCT00000026869 - EnsemblBacteria: EBESCT00000055522 - GeneID: 913848 - GeneID: 959067 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z1422 - KEGG: ecs:ECs1159 - GeneTree: EBGT00050000011095 - HOGENOM: HBG416356 - OMA: EVANYDE - ProtClustDB: PRK10174 - BioCyc: ECOL83334:ECS1159-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8525; Mature: 8393
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDK CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCC DSLFWGEQTIERKNV CCCCCCHHHHHHCCC >Mature Secondary Structure PTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDK CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCC DSLFWGEQTIERKNV CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796