Click here to switch to the map view.

The map label for this gene is yceJ

Identifier: 218700440

GI number: 218700440

Start: 2148426

End: 2148992

Strand: Direct

Name: yceJ

Synonym: ECIAI39_2106

Alternate gene names: 218700440

Gene position: 2148426-2148992 (Clockwise)

Preceding gene: 218700439

Following gene: 218700442

Centisome position: 41.86

GC content: 50.44

Gene sequence:

>567_bases
ATGTCATTCACAAATACCCCTGAACGCTATGGTGTTATATCTGCGGCCTTACATTGGATAAGCGCAATTATTGTCTACGG
CATGTTTGCTTTAGGTCTGTGGATGGTCACGCTCAGTTATTACGATGGCTGGTATCACAAAGCACCCGAACTGCATAAAA
GCATCGGTATTTTGTTAATGATGGGGCTGGTTATTCGCGTTCTGTGGCGCGTCATATCTCCACCGCCGGGTCCGCTGCAA
AGTTATTCGTCAATGACTCGTCTTGGCGCAAAGGCTGGACATCTCGCATTGTACCTATTGCTGTTCGCCATCGGCATCAG
CGGCTATCTGATCTCAACTGCCGATGGTAAACCGATCAGCGTTTTTGGCTGGTTTGACGTCCCCGCGACCCTCGCCGACG
CTGGCGCACAGGCTGACTTTGCCGGTGCCCTGCATTTTTGGCTCGCGTGGAGCGTCGTAGTACTGTCCGTTATGCATGGA
TTTATGGCCCTGAAGCATCATTTCATCGATAAAGACGACACTCTGAAGCGCATGCTGGGAAAGTCGTCATCTGACTATGG
AGTATAA

Upstream 100 bases:

>100_bases
GAAATAAAAATAAATATCATTCGATTTGTTATTTTTGTGTTGCAATTCATTCTCCGACACGCCATTTTCTTTCTCTCGCA
AATTCGTTTTGGATGCACTT

Downstream 100 bases:

>100_bases
AAAATGAAAAAAAGCCTGCTTGGTTTAACCTTCGCTTCCCTGATGTTCTCTGCCGGTTCAGCGGTTGCCGCCGATTACAA
AATTGACAAAGAAGGTCAGC

Product: putative cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSFTNTPERYGVISAALHWISAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLQ
SYSSMTRLGAKAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
FMALKHHFIDKDDTLKRMLGKSSSDYGV

Sequences:

>Translated_188_residues
MSFTNTPERYGVISAALHWISAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLQ
SYSSMTRLGAKAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
FMALKHHFIDKDDTLKRMLGKSSSDYGV
>Mature_187_residues
SFTNTPERYGVISAALHWISAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLQS
YSSMTRLGAKAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGF
MALKHHFIDKDDTLKRMLGKSSSDYGV

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=188, Percent_Identity=96.8085106382979, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20682; Mature: 20550

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTNTPERYGVISAALHWISAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH
MGLVIRVLWRVISPPPGPLQSYSSMTRLGAKAGHLALYLLLFAIGISGYLISTADGKPIS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCEEE
VFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG
EEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
KSSSDYGV
CCCCCCCC
>Mature Secondary Structure 
SFTNTPERYGVISAALHWISAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH
MGLVIRVLWRVISPPPGPLQSYSSMTRLGAKAGHLALYLLLFAIGISGYLISTADGKPIS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCEEE
VFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG
EEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
KSSSDYGV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]