Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 218700003

GI number: 218700003

Start: 1702413

End: 1703000

Strand: Direct

Name: uidR [C]

Synonym: ECIAI39_1632

Alternate gene names: 218700003

Gene position: 1702413-1703000 (Clockwise)

Preceding gene: 218700002

Following gene: 218700004

Centisome position: 33.17

GC content: 47.96

Gene sequence:

>588_bases
GTGATAGGCCAGGAGACAGAAATGACCAGCAAGCTGGAGATACGCCACAAACAGCGTCAGGATGAAATCATTAACGCCGC
CCGTCGGTGTTTTCGTCGCTGCGGATTTCATGCCGCCAGTATGTCGCAAATTGCCAGCGAAGCTCAGCTTAGCGTGGGTC
AGATATATCGTTACTTCGCCAACAAAGACGCCATTATTGAAGAGATGGTTCGCCGTATCATCGACTTTCGTATTGCCCAA
ATGGACATTGACGCGCGTACCGATCACTTTCCGGAAGTTCTTGCCTTGCGTAAATCCTTAAATGAGGACGACGACGCGCT
GATGCTGGAAGTGGCTGCAGAAGCCACACGCAACCCGCGGGTTATGGCAATGCTTGAAGAAGCTGACGCCAGAATGTTCG
CTAACGGTTGTGCTCATATGAAAAGAATGCATCCCCATCTTAGCGACGAGCACATTCGTTGCTGCGTTGAAGTGTTTGCT
ACCATGATGGAAGGTACGGTTTATCGTCGTTTAACACCGCAAAAAAGCGATCCACAACATCTGCAGGAAATATATCAGGA
TATTGTTAGTATGTTGATAAATAAATAA

Upstream 100 bases:

>100_bases
TTCATTATCAGAATATGCACCATGAATAAGATAAAAATACTTTCCATTACTTTGGAGAAACGTATAATCAGCAAAAAATG
AGAACGATCATTCTCACCAA

Downstream 100 bases:

>100_bases
GAACAGAATTAACCAATAGCGGGGGATATTAATCCCCCTTATTTCATTGCGAAATTCATTTCGCGATGCGGGTTCGTTAT
AACTGAATATCCCTGACATA

Product: putative transcriptional repressor

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator EefR; HTH-Type Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; HTH-Type Transcriptional Regulator BetI; Regulatory Protein Tetr

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQ
MDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFA
TMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK

Sequences:

>Translated_195_residues
MIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQ
MDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFA
TMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK
>Mature_195_residues
MIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQ
MDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFA
TMMEGTVYRRLTPQKSDPQHLQEIYQDIVSMLINK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22616; Mature: 22616

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
VMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LQEIYQDIVSMLINK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGQETEMTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
NKDAIIEEMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
VMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LQEIYQDIVSMLINK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA