Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
Click here to switch to the map view.
The map label for this gene is 218699977
Identifier: 218699977
GI number: 218699977
Start: 1677314
End: 1678225
Strand: Direct
Name: 218699977
Synonym: ECIAI39_1606
Alternate gene names: NA
Gene position: 1677314-1678225 (Clockwise)
Preceding gene: 218699976
Following gene: 218699978
Centisome position: 32.68
GC content: 36.95
Gene sequence:
>912_bases ATGATTAGATATAGTGGAATATTTCTATCGCTGTTAATGCTTTCAGGTTGTGCAACCGAAGCATTGAAGAATGAACAAGC TGAAACTGTTATTACTGCGGGTAACAAGGCGGTTGCGGCGAATGCAAGTTTCTTTAAACAATACTATGCTTCTCGTGAAA ACTTCCTTGTTAATTTTTATGCGACTAATCCGGATTGTGCATTGCGACCTGATTATACCATAGATATAGGCGGTGATGGT AATGGCGGAAAATTATGCCAGCGCCCTGGGCCAAATACAAAAAAAGTACAATTAGTCCCTTTCGAGAAAGAAAAATTACT GGCTTCAATGGAAGTCATTAATAGCATGAGCGCTTATGTAGAACTTCTGACTGAGGACATGGCAACGACAGAAAGTCAGC AAGTGGCATTACTTAAACAGGCTCTGGATCACGCAAACAACGCACAAACACTACTTGGTATTTCACATAGCAAAGATTTA GCACAATCTGCAGCAGCGGTTAAAGATTTGGTAAATTATTTCAATGAGTTATATATAATAAAAGTCAATTCTGGAAAAAT AGGCAAAACGGTAGATGAAAACTGGGTAAGACTTATAGGGAACATGACAGTTTTGCGTAATGATATTTATACAAAAAGCA ATAAGATTGAAAATTATACCTTTGCGAATGTGCATGATAATATGTTTTATTATAATACGGCATCTAAAAACGCTAAGAAT ACAGAGTTTAACACTCTGAAAAACAGGAAGGAGTTTCTAAGTTCAGTAATCAATGTGAATGAAACCAGGCTACAGGCATC GGCACCTGCCATGCCCGCAATTGAGGCTTTAAATGCCTTTATAGATAAGGGTGATTATCTGAATAATTTATATGTTAATA AAACACGCACGGCAGCTGAACAAAAAAGTTAA
Upstream 100 bases:
>100_bases GTATTTTAATTTAATTTCATACTTGCTTATGAATATTACCAGGAAATAGCCACATTACTATTTAATTATCTGAGATAAAC TCAACGTCAAGAGGTGGGTT
Downstream 100 bases:
>100_bases ATGAGATATTGCGCGCACAGGTCATTAGTGGGTTAAAGGCGTCTGAGGGGCTGGCAAAATTACTTATTGCCAGCGGAATA ATGTTATAGGAGGCTTTTTA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIRYSGIFLSLLMLSGCATEALKNEQAETVITAGNKAVAANASFFKQYYASRENFLVNFYATNPDCALRPDYTIDIGGDG NGGKLCQRPGPNTKKVQLVPFEKEKLLASMEVINSMSAYVELLTEDMATTESQQVALLKQALDHANNAQTLLGISHSKDL AQSAAAVKDLVNYFNELYIIKVNSGKIGKTVDENWVRLIGNMTVLRNDIYTKSNKIENYTFANVHDNMFYYNTASKNAKN TEFNTLKNRKEFLSSVINVNETRLQASAPAMPAIEALNAFIDKGDYLNNLYVNKTRTAAEQKS
Sequences:
>Translated_303_residues MIRYSGIFLSLLMLSGCATEALKNEQAETVITAGNKAVAANASFFKQYYASRENFLVNFYATNPDCALRPDYTIDIGGDG NGGKLCQRPGPNTKKVQLVPFEKEKLLASMEVINSMSAYVELLTEDMATTESQQVALLKQALDHANNAQTLLGISHSKDL AQSAAAVKDLVNYFNELYIIKVNSGKIGKTVDENWVRLIGNMTVLRNDIYTKSNKIENYTFANVHDNMFYYNTASKNAKN TEFNTLKNRKEFLSSVINVNETRLQASAPAMPAIEALNAFIDKGDYLNNLYVNKTRTAAEQKS >Mature_303_residues MIRYSGIFLSLLMLSGCATEALKNEQAETVITAGNKAVAANASFFKQYYASRENFLVNFYATNPDCALRPDYTIDIGGDG NGGKLCQRPGPNTKKVQLVPFEKEKLLASMEVINSMSAYVELLTEDMATTESQQVALLKQALDHANNAQTLLGISHSKDL AQSAAAVKDLVNYFNELYIIKVNSGKIGKTVDENWVRLIGNMTVLRNDIYTKSNKIENYTFANVHDNMFYYNTASKNAKN TEFNTLKNRKEFLSSVINVNETRLQASAPAMPAIEALNAFIDKGDYLNNLYVNKTRTAAEQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33637; Mature: 33637
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYSGIFLSLLMLSGCATEALKNEQAETVITAGNKAVAANASFFKQYYASRENFLVNFY CEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHCCCCCEEEEEE ATNPDCALRPDYTIDIGGDGNGGKLCQRPGPNTKKVQLVPFEKEKLLASMEVINSMSAYV ECCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH ELLTEDMATTESQQVALLKQALDHANNAQTLLGISHSKDLAQSAAAVKDLVNYFNELYII HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEE KVNSGKIGKTVDENWVRLIGNMTVLRNDIYTKSNKIENYTFANVHDNMFYYNTASKNAKN EECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCC TEFNTLKNRKEFLSSVINVNETRLQASAPAMPAIEALNAFIDKGDYLNNLYVNKTRTAAE CHHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHC QKS CCC >Mature Secondary Structure MIRYSGIFLSLLMLSGCATEALKNEQAETVITAGNKAVAANASFFKQYYASRENFLVNFY CEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHCCCCCEEEEEE ATNPDCALRPDYTIDIGGDGNGGKLCQRPGPNTKKVQLVPFEKEKLLASMEVINSMSAYV ECCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH ELLTEDMATTESQQVALLKQALDHANNAQTLLGISHSKDLAQSAAAVKDLVNYFNELYII HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEE KVNSGKIGKTVDENWVRLIGNMTVLRNDIYTKSNKIENYTFANVHDNMFYYNTASKNAKN EECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCC TEFNTLKNRKEFLSSVINVNETRLQASAPAMPAIEALNAFIDKGDYLNNLYVNKTRTAAE CHHHHHHHHHHHHHHHHCCCHHHEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHC QKS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA