Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is yciQ
Identifier: 218699975
GI number: 218699975
Start: 1674169
End: 1676058
Strand: Direct
Name: yciQ
Synonym: ECIAI39_1604
Alternate gene names: 218699975
Gene position: 1674169-1676058 (Clockwise)
Preceding gene: 218699974
Following gene: 218699976
Centisome position: 32.62
GC content: 47.3
Gene sequence:
>1890_bases ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCGGAAAACACGGA GATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCGGATGGGGTGCTCGACATCAAAG AAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCGCGACTCTGGATGCAGCCT GATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTG GCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT ATCAGGTTAAAAATGCTTTCCTGCGTGAAGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTT GAAATTTATAAGACCCTATTTTCACTCAAGTTGCCTGATATTGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACTGG AGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAG ATTTCACGGTACTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCCCGGCTCCACAAACGACGAATATTTTCAGCCAT CTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCTTGTCTATTCCTGGTTTGTGGATGGTTATATCTCTGGAA GCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGCATGTTACGTC TCGATGCGAAGCTGGTTTACGACGATAAAGGTTTTTGTGCCGATATCGTAAATCTGATTGTGAAAGGAAAAATTCATCTG GAAGATCAGTATGATAAGAACCAGCAAATCCTGATTCGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACTGCC CGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTAC GCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGCCTGATACGTTTTTGCAA TGGGGCGGAATGGCGATATTGGCGGTCATTCTCTACGGTAACCTGAGTCCCGTAGGTTGGGCAGGAATGAGTCTGGTTGG CGATATGTTTATTATGATCTGCTGGCTTCTTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACA AGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCGCTGATTTGTTCAGGCGTGGCCTTTTATTCTCTCTATATC AATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCTGTTTTCCTGACCGGTTATCTCACTGG CATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCGCGGTGAAGCTATCGTTAACTATC TTGCGCGTAAAGAGGCAGCAACACACAGTGGGCGGCGGAGGAAAGGGGAAACACGGAAACTGGATTACGCTTTGTTAGGT TGGGCGGTCTCGGCAAACCTTGGCAGAGAATGGGCAGCACGTATCACCCCATCACTCACAGCGGCTGTTCGCGCCCCGGA AATTGCCCGTAGTGGCGTTTTGTTCTCATTACAGACGCACCTGAGTTGCGGGGCCTATACCAGTTTGTTGGGGCGGAGCT ATTCCGGTGGTGGTTCTGGCGCTGGTGGCGGAGGCGGTAGTGGCTGGTAA
Upstream 100 bases:
>100_bases GGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTG CGTTCCACGGATGGAAGACT
Downstream 100 bases:
>100_bases TCAAGCTGATATTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACG TCGAGTCGTTTACTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQTHLSCGAYTSLLGRSYSGGGSGAGGGGGSGW
Sequences:
>Translated_629_residues MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQTHLSCGAYTSLLGRSYSGGGSGAGGGGGSGW >Mature_628_residues AGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD GDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFE IYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSHL LLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLE DQYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQW GGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYIN VGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGW AVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQTHLSCGAYTSLLGRSYSGGGSGAGGGGGSGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=96.4227642276423, Blast_Score=1201, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 71299; Mature: 71168
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEEEECCCCCEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS HCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQTH HCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHCCCCHHHHHCCCHHHHCCEEEEEEHH LSCGAYTSLLGRSYSGGGSGAGGGGGSGW CCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEEEECCCCCEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS HCCCCCCEEEEEEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYARGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQTH HCCCCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHCCCCHHHHHCCCHHHHCCEEEEEEHH LSCGAYTSLLGRSYSGGGSGAGGGGGSGW CCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]