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The map label for this gene is ompW

Identifier: 218699963

GI number: 218699963

Start: 1663444

End: 1664082

Strand: Direct

Name: ompW

Synonym: ECIAI39_1593

Alternate gene names: 218699963

Gene position: 1663444-1664082 (Clockwise)

Preceding gene: 218699959

Following gene: 218699973

Centisome position: 32.41

GC content: 49.77

Gene sequence:

>639_bases
ATGAAAAAGTTAACAGTGGCGGCTTTGGCAGTAGCAACTCTTCTCTCTGGCAGTGCCTTTGCGCATGAATCCGGCGAATT
TTTTATGCGTGCAGGTTCTGCAACCGTACGTCCAACAGAAGGTGCTGGTGGTACGTTAGGAAGTTTGGGTGGATTCAGCG
TGACCAATAACACTCAACTGGGCCTGACGTTTACTTATATGGCGACCGACAACATTGGTGTGGAATTACTGGCAGCAACG
CCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCGTTCATCATCTGCCGCCAACACTGATGGCGCA
GTGGTATTTTGGTGATGCCAGCAGCAAATTCCGTCCTTACGTTGGTGCAGGTATTAACTACACCACCTTCTTTGATAATG
GATTTAACGATCATGGCAAAGAGGCGGGGCTTTCCGATCTCAGTCTGAAAGACTCCTGGGGAGCTGCCGGGCAGGTGGGG
GTTGATTATCTGATTAACCGTGACTGGTTGGTTAACATGTCAGTGTGGTACATGGATATTGATACGACTGCCAATTATAA
ACTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAA

Upstream 100 bases:

>100_bases
AGGGTGAATTACCATATGTAATGTGATCTGTGTAGGATCATTTGTTACCCCAATGTGGGTATATTCGTCACGTTTTTATA
ACCATAACGACGGAGCGGAT

Downstream 100 bases:

>100_bases
TTCCGCACAAAAATGACCCCGTAATTACGGGGTCAATAAGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCA
TCAGTTTCAGAGCGAATTAA

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKLTVAALAVATLLSGSAFAHESGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_212_residues
MKKLTVAALAVATLLSGSAFAHESGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
>Mature_212_residues
MKKLTVAALAVATLLSGSAFAHESGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF

Specific function: Acts as a receptor for colicin S4 [H]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=99.0566037735849, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22914; Mature: 22914

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTVAALAVATLLSGSAFAHESGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL
CCCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCEECCCCCCCCCCCCCCCEEECCCCEE
GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY
EEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCEEEEECCCHHHEEEEEECCCCCCCCCE
VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI
ECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKKLTVAALAVATLLSGSAFAHESGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL
CCCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCEECCCCCCCCCCCCCCCEEECCCCEE
GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY
EEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCEEEEECCCHHHEEEEEECCCCCCCCCE
VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI
ECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 9629924; 10348872 [H]