Click here to switch to the map view.

The map label for this gene is emtA

Identifier: 218699895

GI number: 218699895

Start: 1591957

End: 1592568

Strand: Direct

Name: emtA

Synonym: ECIAI39_1524

Alternate gene names: 218699895

Gene position: 1591957-1592568 (Clockwise)

Preceding gene: 218699888

Following gene: 218699897

Centisome position: 31.02

GC content: 51.63

Gene sequence:

>612_bases
GTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTG
GAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGCGTCGATC
CACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTG
ATGCAGATAAAAGCTTCAACCTCCGGACGTGATGTATATCGTCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCT
GAAAAATCCGGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAG
ATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATATGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGAT
CGGAAAAAGGCGATCAGCAAAATCAACGATCTGGATGCTGATGAGTTCCTCGATCACGTAGCGCGAAATCATCCTGCGCC
GCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAA

Upstream 100 bases:

>100_bases
TGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCC
AGGCTATAAGGATAGAAGAA

Downstream 100 bases:

>100_bases
ATCAGTCGCGCACTTTGTCCGCTTTTTTCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTCCACC
GTCGGGCTGACGTTAAGAAA

Product: lytic murein endotransglycosylase E

Products: NA

Alternate protein names: Peptidoglycan lytic endotransglycosylase [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGL
MQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM

Sequences:

>Translated_203_residues
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGL
MQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM
>Mature_203_residues
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGL
MQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division (Potential) [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87081855, Length=203, Percent_Identity=99.0147783251232, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI87082191, Length=166, Percent_Identity=40.3614457831325, Blast_Score=136, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 22213; Mature: 22213

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCHHHHHHH
IAIESGGNPNAVSKSNAIGLMQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY
HEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHH
LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHV
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARNHPAPQAPRYIYKLEQALDAM
HHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCHHHHHHH
IAIESGGNPNAVSKSNAIGLMQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY
HEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHH
LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHV
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARNHPAPQAPRYIYKLEQALDAM
HHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12384590 [H]