Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is 218699887
Identifier: 218699887
GI number: 218699887
Start: 1582726
End: 1583751
Strand: Direct
Name: 218699887
Synonym: ECIAI39_1514
Alternate gene names: NA
Gene position: 1582726-1583751 (Clockwise)
Preceding gene: 218699886
Following gene: 218699888
Centisome position: 30.84
GC content: 55.07
Gene sequence:
>1026_bases ATGTCTGTATATACAACTGCAGAATTACTGGCATCGACCCAGCATCACTTTAAGTTCGATCCGCTGTTTCTGCGCCTGTT TTTCCGTGAAACCTATCCTTTCACCACGGAAAAAGTCTATCTCTCACAAATTCCGGGACTGGTAAACATGGCGCTGTACG TTTCGCCGATTGTTTCCGGTGAGGTTATCCGATCCCGTGGCGGCTCCACCTCTGAATTTACGCCGGGTTATGTCAAACCC AAGCATGAGGTGAATCCGCAGATGACCCTGCGTCGCCTGCCGGATGAAGATCCGCAGAACCTGGCTGACCCGGCTTACCG TCGTCGCCGTATTATTCGGCAGAATATGCTGGATGAAAATCTGGCGATTGCCCAGGTCGAAGAGATGCAGGCAGTTTCTG CCGTGCTTAAGGGCAAATACACCATGACCGGTGAAGCCTTCGATCCGGTTGAGGTGGATATGGGCCGCAGTGCGGCGAAT AACATCACGCAGTCCGGCGGCACGGAGTGGAGTAAGCGTGACAAGTCCACGTATGACCCGACCGACGATATCGAAGCCTA CGCGCTGAACGCCAGCGGTGTGGTGAATATCATCGTGTTTGATCCGAAAGGCTGGGCGCTGTTCCGTTCCTTCAAGGCCG TCAGGGAGAAGCTGGATACCCGTCGCGGCTCTCATTCCGAGCTGGAGACAGCGGTAAAAGACCTGGGCAAAGCGGTGTCT TATAAGGGAATGTATGGCGATGTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCT GCCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGTTGCATTCAGGATGCGGACGCAC AGCGCGAAGGCATTAACGCCTCTGCCCGTTACCCGAAAAACTGGGTGACCACCGGCGACCCGGCGCGTGAGTTCACCATG ATTCAGTCAGCACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCGTGTCTGTACAACTGGCGTAA
Upstream 100 bases:
>100_bases AAAAAACGGACCGCGTTTGCCGGAACGGCAATCAGCATCGTTTAATCTTCCCCTTCATCAACAAAGGCCGCCTGTGCGGC TTTTTTTATGGAAATAATTT
Downstream 100 bases:
>100_bases TCATGGCCCTTCGGGGCCATTGTTTCTCTGTGGAGGAGTCCATGACGAAAGATGAACTGATTGCCCGTCTCCGCTCGCTG GGTGAACAACTGAACCGTGA
Product: major head protein
Products: NA
Alternate protein names: Head protein gp7 [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSVYTTAELLASTQHHFKFDPLFLRLFFRETYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKP KHEVNPQMTLRRLPDEDPQNLADPAYRRRRIIRQNMLDENLAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAAN NITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKLDTRRGSHSELETAVKDLGKAVS YKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTM IQSAPLMLLADPDEFVSVQLA
Sequences:
>Translated_341_residues MSVYTTAELLASTQHHFKFDPLFLRLFFRETYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKP KHEVNPQMTLRRLPDEDPQNLADPAYRRRRIIRQNMLDENLAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAAN NITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKLDTRRGSHSELETAVKDLGKAVS YKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTM IQSAPLMLLADPDEFVSVQLA >Mature_340_residues SVYTTAELLASTQHHFKFDPLFLRLFFRETYPFTTEKVYLSQIPGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKPK HEVNPQMTLRRLPDEDPQNLADPAYRRRRIIRQNMLDENLAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANN ITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKLDTRRGSHSELETAVKDLGKAVSY KGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTMI QSAPLMLLADPDEFVSVQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lambda phage gpE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005564 [H]
Pfam domain/function: PF03864 Phage_cap_E [H]
EC number: NA
Molecular weight: Translated: 38094; Mature: 37962
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVYTTAELLASTQHHFKFDPLFLRLFFRETYPFTTEKVYLSQIPGLVNMALYVSPIVSG CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC EVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIIRQNMLDEN HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHCCC LAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWSKRDKSTYDP HHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHHCCCCCCHHCCCCCCCC TDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKLDTRRGSHSELETAVKDLGKAVS CCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC YKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINA CCCCCCCEEEEEEECHHHHCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHCCCC SARYPKNWVTTGDPAREFTMIQSAPLMLLADPDEFVSVQLA CCCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCEEEEEEC >Mature Secondary Structure SVYTTAELLASTQHHFKFDPLFLRLFFRETYPFTTEKVYLSQIPGLVNMALYVSPIVSG CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC EVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPAYRRRRIIRQNMLDEN HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHCCC LAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWSKRDKSTYDP HHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHHCCCCCCHHCCCCCCCC TDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKLDTRRGSHSELETAVKDLGKAVS CCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC YKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQREGINA CCCCCCCEEEEEEECHHHHCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHCCCC SARYPKNWVTTGDPAREFTMIQSAPLMLLADPDEFVSVQLA CCCCCCCCCCCCCCHHHEEEECCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]