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The map label for this gene is ydjY

Identifier: 218699682

GI number: 218699682

Start: 1368730

End: 1369407

Strand: Reverse

Name: ydjY

Synonym: ECIAI39_1303

Alternate gene names: 218699682

Gene position: 1369407-1368730 (Counterclockwise)

Preceding gene: 218699683

Following gene: 218699681

Centisome position: 26.68

GC content: 48.08

Gene sequence:

>678_bases
ATGTTGCAACATTATTCAGTGTCATGGAAAAAAGGACTGACTGCACTCTGCTTACTGGCTGTTGCTGGGCTTAGCGGCTG
CGATCAAAAAGAGAATGCGGCTGCAAAAGTGGAATACGACGAACTTTCGAACAGCCAACCGCTGCGTGTCGATGCTAATA
ACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGAT
GGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGG
TACACCGGGCGAAAACATGACGATGGATAATAAAGAAGCGACCCACGTCACAGGCAGCAAACTGGATATTTCGGTCAACT
GGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGC
GGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAA
TGCAACATACACTTATGGTGCGGTTGAAAAACGCGGTGAAGTTAAATTCAAAGGCAATGCCTCGGTTCTCCCGGCGGATA
ACACACTGGCAACGGTTACCTTTAAAATCACCGAATAA

Upstream 100 bases:

>100_bases
CTCGTCCAGCTCGCAAAACTCTACGCTCGACACAAACATGTGGATCTGTCTGCTTCTCGCCGCAGCCCACTTACTCACCC
AAAAAATGAAGGATAGAACG

Downstream 100 bases:

>100_bases
AGCCAGGATAAAGGATGATGAAGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCT
ATGCTGCTGGCATGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDELSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKEATHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Sequences:

>Translated_225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDELSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKEATHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
>Mature_225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDELSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKEATHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=225, Percent_Identity=97.7777777777778, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24228; Mature: 24228

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDELSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKEA
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDELSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKEA
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]