Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is uxuB
Identifier: 218698166
GI number: 218698166
Start: 5071598
End: 5073058
Strand: Direct
Name: uxuB
Synonym: EC55989_4988
Alternate gene names: 218698166
Gene position: 5071598-5073058 (Clockwise)
Preceding gene: 218698165
Following gene: 218698167
Centisome position: 98.38
GC content: 57.56
Gene sequence:
>1461_bases ATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGAGCATTCTCGTCTGGAATCACGCATTGTGCA TCTCGGTTGCGGGGCGTTTCACCGCGCGCACCAGGCGCTGTATACCCATCATCTGCTGGAAAGCACCGACAGCGACTGGG GTATCTGCGAAGTTAACCTGATGCCAGGTAACGACCGTGTGCTGATTGAAAACCTGAAAAAACAGCAACTGCTGTACACC GTGGCGGAAAAAGGCGCGGAAAGCACCGAACTGAAAATTATCGGTTCGATGAAAGAAGCGCTGCATCCGGAAATCGACGG CTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAGACGGCGATTGTCTCTCTGACGGTCACGGAAAAAGGCTACTGCG CTGATGCGGCAAGCGGTCAGTTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCT GCGATTGGTTACATCGTCGAAGCCCTGCGTCTGCGTCGTGAAAAAGGGCTGAAAGCGTTTACGGTGATGTCCTGCGATAA CGTGCGTGAAAACGGTCATGTGGCGAAGGTCGCGGTACTGGGGCTGGCTCAGGCGCGTGACCCGCAGCTGGCGGCATGGA TTGAAGAGAACGTCACCTTCCCGTGCACCATGGTTGACCGCATCGTTCCGGCGGCGACGCCAGAAACCTTACAGGAAATT GCTGACCAGCTGGGTGTTTATGACCCGTGCGCCATTGCCTGCGAACCGTTCCGTCAGTGGGTGATTGAAGATAACTTCGT TAATGGTCGTCCGGACTGGGATAAAGTGGGCGCACAGTTCGTTGCAGACGTTGTGCCGTTCGAAATGATGAAGCTGCGTA TGCTGAACGGCAGCCACTCTTTCCTGGCATATCTCGGTTACCTCGGCGGCTATGAAACTATTGCCGACACCATGACTAAC CCGGATTATCGCAAAGCGGCCTTTGCCCTGATGATGCAGGAACAAGCGCCAACGCTGTCGATGCCGGAAGGTACGGACCT GAACGCCTATGCGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACG GCAGCCAGAAGTTACCGCAGCGTCTGCTGGATCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCG CTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGTGGATGAGCAGGGTAATGCCATTGACGTGGTCGACCCGATGCT GGCCGAGTTCCAGAAGATTAACGCGCAGTATCAGGGCGCAGACCGCGTGAAAGCGCTGCTGGGCCTGAGCGGTATTTTTG CCGATGATCTGCCGCAGAATGCCGACTTTGTTGGCGCGGTGACGGCGGCATATCAGCAGCTGTGCGAACGCGGCGCGCGC GAGTGTGTGGCTGCGCTGTAA
Upstream 100 bases:
>100_bases GCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTCTGAA GACGGATTCTGGAGTTTACG
Downstream 100 bases:
>100_bases CTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTA CGTGCCAACTTCCAGTGCTA
Product: D-mannonate oxidoreductase, NAD-binding
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTIVDSNLPVARPSWEHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYT VAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTN PDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLA LGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR ECVAAL
Sequences:
>Translated_486_residues MTTIVDSNLPVARPSWEHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYT VAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTN PDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLA LGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR ECVAAL >Mature_485_residues TTIVDSNLPVARPSWEHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTV AEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSA IGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEIA DQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNP DYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLAL GVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGARE CVAAL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=486, Percent_Identity=99.3827160493827, Blast_Score=1006, Evalue=0.0, Organism=Escherichia coli, GI1788497, Length=485, Percent_Identity=55.8762886597938, Blast_Score=554, Evalue=1e-159, Organism=Escherichia coli, GI1787823, Length=472, Percent_Identity=58.0508474576271, Blast_Score=550, Evalue=1e-158, Organism=Escherichia coli, GI48994885, Length=504, Percent_Identity=25.1984126984127, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790028, Length=252, Percent_Identity=28.1746031746032, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324401, Length=476, Percent_Identity=39.4957983193277, Blast_Score=359, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6320765, Length=476, Percent_Identity=39.4957983193277, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 53671; Mature: 53540
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIVDSNLPVARPSWEHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNL CCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE MPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQT ECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHCCCCE AIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAF EEEEEEEECCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE TVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI EEEECCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHS HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH FLAYLGYLGGYETIADTMTNPDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSN HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAI CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCEE DVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ECVAAL HHHHCC >Mature Secondary Structure TTIVDSNLPVARPSWEHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNL CEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE MPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQT ECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHCCCCE AIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAF EEEEEEEECCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE TVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI EEEECCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHS HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH FLAYLGYLGGYETIADTMTNPDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSN HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC PSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAI CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCEE DVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ECVAAL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]