Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698160
Identifier: 218698160
GI number: 218698160
Start: 5066866
End: 5067543
Strand: Direct
Name: 218698160
Synonym: EC55989_4981
Alternate gene names: NA
Gene position: 5066866-5067543 (Clockwise)
Preceding gene: 218698159
Following gene: 218698164
Centisome position: 98.29
GC content: 40.56
Gene sequence:
>678_bases ATGGTTCAGAAAATTTTGTCGGATAAGGTTATGAATGAAAGAGCAAATGCGTATTACTCTTATTATCTTGGAGAGCGTAA TATCTCCGTACTGCCCCTTAATGTTTATGATCCCCCGGAACGTTTTATCGCTTACATAAAAAAAAACAGAGAAAATCTGA ACATCACACTTTCAGATTTTGAACTTGAACAAATCATTTCTGGTATGCGTCTGAAGGCCCTGGCCTTCCTGGTCCCCCTG GAAAAAATATCCTGGATCGCGGGCAGTGAACGCGCATGCTTATTTTCCTGGTATCTGTTGATGCAGTTTATCCAGAATAA CAGGGCAAAAATAAGCGCAGACTTGCTTCAAAAGAATAAACTGTATCTTAAAGAAGAGTATCTGGAAGGGAATGCCTTCC CGTCGGACTCATCGACACAGTTCAGACAAATACTCAGAGTTCTCGATATTCTTTCTGATAAGAATTTGCGGGATGAGTGG ATAATCCAGACCAAAGACAGATGGATACGGGCATTTAAATCAAAGAGTCCTTTCAGTTACCTCCTCCCGGAGAACGAACA TGAATGCATATGGACATGGAATTATTTGAAGGGAAAAAATATTGCACTGGAAAAACTGGCCAGTTTTCCTGGTTCTGCTG ATATTTACCACGCAATTCACCTTTCATTTGACAGGTAA
Upstream 100 bases:
>100_bases TGCCTTTTTATTGACCACCTTAACATACCATTATAAACTTCTTTTTATCATGTTATTATCACCTTATTATGTTTAATTTT CAAGCAACCGGAGAAAGAGG
Downstream 100 bases:
>100_bases TGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC GACAGCGACTTCCGTCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVQKILSDKVMNERANAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDFELEQIISGMRLKALAFLVPL EKISWIAGSERACLFSWYLLMQFIQNNRAKISADLLQKNKLYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEW IIQTKDRWIRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHAIHLSFDR
Sequences:
>Translated_225_residues MVQKILSDKVMNERANAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDFELEQIISGMRLKALAFLVPL EKISWIAGSERACLFSWYLLMQFIQNNRAKISADLLQKNKLYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEW IIQTKDRWIRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHAIHLSFDR >Mature_225_residues MVQKILSDKVMNERANAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDFELEQIISGMRLKALAFLVPL EKISWIAGSERACLFSWYLLMQFIQNNRAKISADLLQKNKLYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEW IIQTKDRWIRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHAIHLSFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26517; Mature: 26517
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQKILSDKVMNERANAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDF CCHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECC ELEQIISGMRLKALAFLVPLEKISWIAGSERACLFSWYLLMQFIQNNRAKISADLLQKNK CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHCCC LYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEWIIQTKDRWIRAFKSKSPFSY HHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCCCCEEE LLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHAIHLSFDR ECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEEECC >Mature Secondary Structure MVQKILSDKVMNERANAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDF CCHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECC ELEQIISGMRLKALAFLVPLEKISWIAGSERACLFSWYLLMQFIQNNRAKISADLLQKNK CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHCCC LYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEWIIQTKDRWIRAFKSKSPFSY HHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEECHHHHHHHHHCCCCEEE LLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHAIHLSFDR ECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA